Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mitosporidium_20daphniae_20[genbank_20GCA_5F000760515.1_202014-09-
30] 612 sequences; 5,636,959 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq49 93.3 4e-14
>seq49
Length=10291
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 94780 TCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCT 94839
|||||||| || || || ||| | || | || || || ||||| | ||||| ||
Sbjct 9950 TCCTCCTCGCAGTCTCAGCACTAGATGGAGGGTTGACTCTTTTTGAATATTATAGTCAGA 10009
Query 94840 CATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGG 94899
| || | |||||||||||| ||||| |||| || | | |||||| || || ||
Sbjct 10010 GAGCGTTCTTCCATCCTCCAGCTGCTTTCCAGCAAATATAAGGCGTTGCTGGTCAGGCGG 10069
Query 94900 AATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGAC 94959
|| ||||||||||| | |||||| ||| || | | ||||| | || ||
Sbjct 10070 TATTCCTTCTTTGTCTTGGATTTTTTGCTTTACATTTTCAATGGTGTCTGAAGATTCAAC 10129
Query 94960 GTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008
|| | |||||| ||||| |||||||| ||||| || ||||| ||||||
Sbjct 10130 TTCTAGCGTGATTGTTTTCCCAGTAAGTGTTTTGACGAAGATTTGCATG 10178
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448287770572320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |