Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mitosporidium_20daphniae_20[genbank_20GCA_5F000760515.1_202014-09- 30] 612 sequences; 5,636,959 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq22 140 5e-29 >seq22 Length=73423 Score = 140 bits (154), Expect = 5e-29 Identities = 189/261 (72%), Gaps = 2/261 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||||||||| |||| |||||| || ||||| || |||||||||||||| || || Sbjct 29644 GCCAAGCGTCATCGAAAGAT-TCTTCGTGACAACATTCAGGGAATCACCAAGCCCGCCAT 29702 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 |||||||| || || |||||||| || |||||| | ||||| | |||||||||||| Sbjct 29703 TCGTCGTCTTGCACGCCGTGGTGGTGTTAAGCGTATTTCTGGTCTTATCTATGAAGAGAC 29762 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| ||| | |||| | | | ||| || | || || || |||||||| Sbjct 29763 TCGCACCGTTCTTCGCGTCTTTTTGGAAAACGTCATTCGCGACTCTGTCACTTATACCGA 29822 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 || || || || ||||| |||||| | ||||| |||| ||||| | || || ||||| Sbjct 29823 ACATGCCAAGCGCAAGACAGTCACCGCAATGGACGTCGTTTATGCGCTTAAGCGCCAAGG 29882 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 |||| | || || ||||| Sbjct 29883 TCGTACTCTCTACGGCTTTGG 29903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074640444116