Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mitosporidium_20daphniae_20[genbank_20GCA_5F000760515.1_202014-09- 30] 612 sequences; 5,636,959 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq44 93.3 7e-14 >seq44 Length=71667 Score = 93.3 bits (102), Expect = 7e-14 Identities = 226/342 (66%), Gaps = 34/342 (10%) Strand=Plus/Plus Query 193436 AGCATTAATAACAGGCATAACTGGGCAGGATGGATCTTATCTTGCCGAGTTTCTTTTGTC 193495 ||| || || || ||||| || || ||||||||||| |||||| ||| ||||| ||||| Sbjct 322 AGCGTTTATTACCGGCATTACGGGCCAGGATGGATCGTATCTTTGCGAATTTCTATTGTC 381 Query 193496 TAAGGGATATGAAGTTCATGGTATTGTAAGGAGAAGTTCCCTAATCAATACTCATAGAAT 193555 ||||||||||| |||||||| | || | | |||| |||||||| ||||| Sbjct 382 AAAGGGATATGATGTTCATGGGCTGATACGTCGTTCTTCCTCCTTCAATACTTCAAGAAT 441 Query 193556 TGATCA---TATCTATGA----------GAAGATCACT-----CTTCATTATGGAGATCT 193597 || || |||| |||| ||||||| | || || ||||| ||||| Sbjct 442 AGAGCACATTATCAATGATGTTACTTGTAAAGATCATTTTTACCTGCACTATGGCGATCT 501 Query 193598 AACTGAT--------CCTGTAAATGTTATGGGTGTCATTAGGGCAGTTGAACCTGCTGAG 193649 | ||| ||| | |||| ||| |||| | ||| ||| | ||| Sbjct 502 TTCCGATTCAACATGCCTTTCAATGCTAT---TGTC-CAAAATCAG----ACCAACGGAG 553 Query 193650 ATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGCCAGAGTATACT 193709 || || || |||| |||||| ||||| | || || ||||| ||| ||||||||||| Sbjct 554 ATATACAACCTTGCGGCTCAATCCCATGTGATGGTATCTTTTGACATGGCAGAGTATACT 613 Query 193710 TCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCA 193751 | |||||||| | ||||| ||| | || | |||||| Sbjct 614 GGGCAAGTTGATGCCATTGGAACCCTTCGTATTTTGGAAGCA 655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807549022202720