Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mitosporidium_20daphniae_20[genbank_20GCA_5F000760515.1_202014-09- 30] 612 sequences; 5,636,959 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq113 149 1e-30 >seq113 Length=5777 Score = 149 bits (164), Expect = 1e-30 Identities = 167/218 (77%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 203843 TCCACCGTGAACTGAATGGCGTTCA-CGGCAGGCCTGCTTCTCAGATAGTACATGCCGGT 203901 || || || || | |||||| |||| | |||||| | ||| |||||| ||||||||||| Sbjct 3326 TCGACGGTAAATTTAATGGC-TTCAGCTGCAGGCTTTGTTCGCAGATAATACATGCCGGT 3384 Query 203902 CTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTC 203961 |||||| ||||| | |||| ||| | ||||| |||| || || | | || || Sbjct 3385 CTTTAGCCCCTTTTTCCACGAGTAAAAATGCATAGAAGTGAGCTTCGAGATGGAAGGCTC 3444 Query 203962 GGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCA 204020 ||| |||||||| || |||||||||||||||||||| ||||||||| || || |||||| Sbjct 3445 GGCAATGTGAATATTGAGAGACTGGCTTTGGTCGAT-AAAGGCGCCTCGGTCCACGGCCA 3503 Query 204021 TATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTC 204058 ||| || ||| |||| || | ||| |||||||| ||| Sbjct 3504 TATCAATGATGCTCTTTTGTGGAATTTCCCACACGGTC 3541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795149117062720