Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mitosporidium_20daphniae_20[genbank_20GCA_5F000760515.1_202014-09-
30] 612 sequences; 5,636,959 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq366 316 2e-80
seq594 105 5e-17
seq598 87.8 1e-11
>seq366
Length=38039
Score = 316 bits (350), Expect = 2e-80
Identities = 969/1481 (65%), Gaps = 33/1481 (2%)
Strand=Plus/Plus
Query 517250 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 517309
|||||| |||||| ||||| ||||| ||||| ||||| | || |||| || ||||||
Sbjct 21960 TTATCAACGGCAGAGACATTGAGAATGCCATTAGCATCGATGTCGAATGAAACCTCAATT 22019
Query 517310 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 517369
|| || || || | | || ||||| || || ||||| | || | ||||| || |
Sbjct 22020 TGGGGCACACCACGGGGGGCTGGTGGAATACCGTCCAACTCGAACTTGCCCAGCAAATGA 22079
Query 517370 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 517429
|| ||||| || | | || || || || || | ||| ||| |||| | | ||| ||
Sbjct 22080 TTGTCTTTGGTCATGGTGCGCTCGCCTTCAAAGACTTGAATAAGAACTCCGGGTTGGTTG 22139
Query 517430 TCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATA 517489
|| ||||| || | |||||| || |||||| |||||| |||||||| | | |||
Sbjct 22140 TCAGAATACGTGGAAAATACCTGGGCTTTTTTCGTAGGAATCGTTGTGTTGCGAGTGATA 22199
Query 517490 ATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACT 517549
| |||||| | ||| || || || || | ||| ||||| | |||| |||||| |
Sbjct 22200 AGGGGGGTCATGACACCTCCGGCAGTCTCGATACCGAGAGACAAGGGAGCGACATCCAAA 22259
Query 517550 AGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCA 517609
|| | |||| ||| ||||| | | | ||| ||| || | || || | ||
Sbjct 22260 AGCAAGATATCTTGGGTCTTTTCCGAAATATCGCCATTAAGGATGGAAGCCTGGACGGCT 22319
Query 517610 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 517669
|||||||| |||||||| || |||||||| | | | || || | || |||||||||
Sbjct 22320 GCACCATAAGCAACAGCCTCGTCAGGATTGATGCTCTTGTTGAGCTCCTTTCCATTGAAA 22379
Query 517670 AAAT-TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAAT 517728
|| | ||| | | || | | | ||||| || | || || || || | |||||
Sbjct 22380 AAGTCTTGCACCAGCTTCT-GGATTCTGGGAATGCGGGTGGAGCCACCGACAAGGACAAT 22438
Query 517729 TTCATGCACCTGTGATTTATCCAGTTTT--GAATCCAATAAAACTTTTTCAACGGGTTCA 517786
||| | ||| |||||| | | |||| |||||| | ||| ||||| ||||| |||
Sbjct 22439 TTCGTCAACC--TGATTTTTGGACTTTTGAGAATCCTTAAGAACCTTTTCCACGGGATCA 22496
Query 517787 AGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACA 517846
|| | | || | ||| ||||| || || || ||| | ||| | | |
Sbjct 22497 AGCGTAGAGCGGAAGAGGTCCTGGCAAAGCTCCTCAAAGCGAGCACGAGTGATGGAGGTG 22556
Query 517847 TTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTA--GTTTGAGTCGAAGAAG 517904
| ||||||| || || || | ||| || | ||||| | | | ||| | | || |
Sbjct 22557 TAGAAATCAATGCCCTCAAATAGAGAGTCGATTTCAACGGAAGCGGTTGTGGCTGAGGAC 22616
Query 517905 ATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATT 517964
| ||| || |||||||| || || ||||| | || | || | ||| ||| |
Sbjct 22617 AAGGTG--CGCTTAGCACGCTCGCAGGCTGTACGAAGACGGCGGATGGCACGTGCGTTTC 22674
Query 517965 GATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACG 518022
| | ||| |||| | || | |||||| || || ||| | ||| | || | |
Sbjct 22675 CAGAGATGTCTTTTTTGTGCTTGCGCTTGAATTCCTCGACAAA--ATGGCTAACCATTCT 22732
Query 518023 ATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 518082
|||||| ||||| ||||| | | || | || | || || |||||| || |
Sbjct 22733 GGAATCAAAGTCTTCTCCTCCAAGATGCGTGTCACCAGCGGTTGCCTTTACTTCAAAGAC 22792
Query 518083 TCCATCTTCAA--GAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATA 518140
||| |||| | |||| ||||| |||||| || |||||||||| |||||| ||
Sbjct 22793 ACCACCTTCCATGGAGAGCAAAGA--AACATCAAAAGTACCACCACCCAAATCAAAGATC 22850
Query 518141 AGTACATTCATTTC---TTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCA 518197
|| ||| | || ||||| | |||||| |||||||| || | || |||||
Sbjct 22851 AGCACAATACGCTCGGTCTTGTCAGATTGTTTATCGAGACCATAAGCGATGGCTGCAGCG 22910
Query 518198 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 518257
|| || || || || || | | ||||| ||||| ||||| || ||||| || ||
Sbjct 22911 GTGGGCTCGTTGATGATGCGGAGCACATTGAGACCGGCAATAGCACCGGCATCCTTGGTT 22970
Query 518258 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCT 518317
||||| | || |||||||| ||||| |||||||| || || || |||| || | ||
Sbjct 22971 GCTTGGCGCTGAGAATCGTTGAAATAGGCAGGAACCGTGATCACAGCATTGGTGA--TCG 23028
Query 518318 T--TACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTT 518375
| |||| | ||| || || || | |||||||| | | ||||| || |||| |
Sbjct 23029 TAGTACCGAGATATGCTTCAGCAGTCTCCTTCATTTTGATGAGGATCATGGAAGAAAGCT 23088
Query 518376 GTTCTGGGGAATATTGCTTGGATTC-ATTTTGATATGATACTTCAAAATATGGTTTATTA 518434
||| || | | | | ||| ||| | |||| || || || | || || |
Sbjct 23089 CTTCGGGAGTAAACTCCTTCTTTTCGCTCTTGA-ATTCAACGCTAATCTTGGGCTTGGTG 23147
Query 518435 CCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTA 518494
||| || || || |||||||| | |||||||| || || ||| || | || | |
Sbjct 23148 TTGGCATCAACGACCTTGAATGGCCAATGCTTCATATCAGACTGGACAATTGGATCGTCA 23207
Query 518495 AAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCT 518554
||| | ||||| | || || || || || | ||||| ||| || || |||||
Sbjct 23208 AAACGACGGCCAATCAGACGCTTAGCGTCGAAGACTGTATTTTCTGGGTTCATGGCAGCC 23267
Query 518555 TGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGA 518614
|||| |||||| ||||||| || ||| | || || ||||| |||| ||||| || |||
Sbjct 23268 TGATTTTTGGCACCATCTCCGATAAGACGCTCAGTGTCTGTGAATGCGACATAGGAGGGA 23327
Query 518615 GTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTA---CCATTTTGCCATACA 518671
||||| | || || |||||||| ||||| || || || | | ||| | | |||
Sbjct 23328 GTTGTCCTGTTTCCCTGATCATTTGCAATGATCTCGACGTGATCTCCAATAAG---GACA 23384
Query 518672 CCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGC 518712
|| || || | || ||||| |||||||||||||||||
Sbjct 23385 CCAACGCAGGAGTAGGTGGTTCCCAAATCAATACCAATAGC 23425
>seq594
Length=21442
Score = 105 bits (116), Expect = 5e-17
Identities = 108/141 (77%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 518166 TTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACAT 518225
|||| |||||||||||||||| ||| || || || || ||||| |||| | | ||||
Sbjct 18360 TTTTGTCAAGACCATACGCAAGAGCTGCGGCCGTAGGCTCATTGATAACACGAAGGACAT 18419
Query 518226 TAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATG 518285
| |||||||| | ||||||||||| ||||| || | || | ||| || |||||||
Sbjct 18420 CCAACCCAGCAATAGTACCTGCATCTTTTGTGGCCTGGCGCTGGGCATCATTGAAATATG 18479
Query 518286 CAGGAACAGTAATAACGGCAT 518306
|||| ||||| | ||||||||
Sbjct 18480 CAGGCACAGTCACAACGGCAT 18500
>seq598
Length=20540
Score = 87.8 bits (96), Expect = 1e-11
Identities = 96/128 (75%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 635438 AAATGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGTCTT 635497
|||||||| || |||||||| || |||||||| || || | | || | ||||| ||
Sbjct 19593 AAATGTACTCTCATTTTGACTGAAGGAGATTCTGCAAAGGCCCTGGCAGTTTCTGGCCTC 19534
Query 635498 AATGTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTT 635557
|| ||||||| ||||||| |||||||| || ||| | || ||||||||||||||
Sbjct 19533 TCCGTAGTTGGAAGGGATTATTTTGGAGTTTATCCGCTTCGTGGGAAACTTTTGAATGTG 19474
Query 635558 AGGGATGC 635565
| |||||
Sbjct 19473 CGCGATGC 19466
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780792030544072
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |