Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mitosporidium_20daphniae_20[genbank_20GCA_5F000760515.1_202014-09- 30] 612 sequences; 5,636,959 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq113 185 1e-41 seq222 89.7 6e-13 seq598 87.8 2e-12 >seq113 Length=5777 Score = 185 bits (204), Expect = 1e-41 Identities = 667/1036 (64%), Gaps = 8/1036 (1%) Strand=Plus/Plus Query 110103 ATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGC 110162 ||| || ||||| || || || | ||||| || | ||| |||| || || || | ||| Sbjct 4054 ATCTGCAAGACCTTGGACGCCAATTCCAATCGGTCTATGTCTCATATTTGATCGCCTAGC 4113 Query 110163 AGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTT 110222 || || || || |||||| ||||| | ||| ||||| || || || || Sbjct 4114 CTCCTCGACAGGATAGAAGTTGACATCGATAATATTATTAAGATTTTTTGTTACCACTTT 4173 Query 110223 CGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGG 110282 | | | ||| || | || |||| || | |||| | || ||| | | | || Sbjct 4174 GGCAACATAATGTAGCATATCAAAATCAAAAGACC-CGTCGCTTT--TGATAAACATCGG 4230 Query 110283 GAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAAT 110342 || ||||| || || || || || || ||| ||| ||||| | ||| | | || Sbjct 4231 AAGTGCAATGGAAGCGAGGTTACAAACGGAAACCTCATCTTTTGATGAGTACTGGATGAT 4290 Query 110343 TTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTT 110402 ||| ||||||||||| || || || ||| |||| ||| || ||||| || || | ||| Sbjct 4291 TTCTGTACACAAGTTTGAGCTTTTGATGGTCCCCAGGTTTTTTTGATTAGACTTTGCGTT 4350 Query 110403 GCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGC 110462 ||| | ||| ||| ||||||||||||| || || |||||| || | | |||||||| Sbjct 4351 GCAAGAATCTTTAAAGAGCATGTATGGCGTTCCGGTTTCCACTTGCGCATCAAGAATGGC 4410 Query 110463 CTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGT 110522 | ||| | | ||| |||| ||| | | ||||||| |||| || | Sbjct 4411 ATACCAGAGCTTTTGGGCAGGGATCGTTTTACGACCAAGACCTTTGGCCTCATATGAAGC 4470 Query 110523 GTACAAGTCCTCAAATTCCTGTCCGTACACA-TCAGAAAGACCCTTCGCCTTGTCGGGAC 110581 || || || ||||| ||| |||| | ||| || || | ||| || | | |||| Sbjct 4471 ATATAACTCTTCAAACTCCGGTCCCCA-ACAGTCGGACAAACCTGGAGCGTCATTTGGAC 4529 Query 110582 AGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACA 110641 |||| || | ||| | ||| | | ||| || | ||||||||||| || || ||||| | Sbjct 4530 AGAAAAGAGTCCACATCCCATCTTGCTCCACTCGTTTCATGAACAGATCGGGTATCCATA 4589 Query 110642 TCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCA 110701 || | ||||| || | ||| ||| |||| || | || || || |||| Sbjct 4590 GGGCATAAAAAAGATCCCTGCACCGACCCTCGTCTTTTCCAAAATTTTTCTTTAAATCCA 4649 Query 110702 AAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACGAC 110761 | || || | | ||| | |||||| || || | ||| | || | || || || Sbjct 4650 AGAAATCGAAAACATCAGCGTGCCAGGGCTCCAAATAAATTGCAAAGGCGCCAGGTCGTT 4709 Query 110762 GA--CCCGCC-TGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAA 110818 | |||||| || | ||||| ||||| || || |||| | ||||| || | | Sbjct 4710 TATTCCCGCCTTGATCGACATATCGTGCAGTCATGTTATAGACACGAAGCATGGGGACTA 4769 Query 110819 TTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGA 110878 | || | || | ||| ||| || ||| ||| | ||| | || | |||| Sbjct 4770 TACCGTTTGAGTAGCCACCTGTTCCAGCAATATAAGACCCAGAGGCTCTTATATTATGGA 4829 Query 110879 TATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTACCAT 110938 |||| | ||||| ||| || || |||| ||||| |||||| | | || || ||| Sbjct 4830 TATGAAGACCAACACCCCCGGCAGACTTGCTAATCAATGCACATGTTTTCAGGGTGTCAT 4889 Query 110939 AAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGAC 110998 | || || |||||||| | | | ||||| | ||| || || || | ||| || | Sbjct 4890 ATATTCCGGTGATCGAATCGTCAGTCATTGCAATCAAAAAACAGGATGAAAGCTGGGGCC 4949 Query 110999 GAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATCT 111058 | || || || ||||| || || || || | ||||| |||||| | || |||||| Sbjct 4950 GCGGTGTACCGGCATTAAAAAGGGTTGGGGAGGCATGGGTGAACATCCGCTGAGACATCA 5009 Query 111059 TGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCA 111118 || || || |||| || ||| || |||| ||||||||| |||| ||||||| || Sbjct 5010 AATTATACGTTTCGATGGCAGAGTCGACGTCTTCACCGTGAATGCCAAGCGCAACTCTCA 5069 Query 111119 TGAACATATATTGAGG 111134 ||| || ||| || || Sbjct 5070 TGATCAGATACTGGGG 5085 >seq222 Length=104519 Score = 89.7 bits (98), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 |||||||||||||||||||||||||||| |||||||||||| | | ||||||| ||| | Sbjct 32919 ATAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGCCGCTGGTTCGACCCCAGC 32860 Query 136776 TGGGAACAGCTTTT 136789 ||||| || |||| Sbjct 32859 TGGGAGCAATTTTT 32846 >seq598 Length=20540 Score = 87.8 bits (96), Expect = 2e-12 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 |||||||||||||||||||||||||||| |||||||||||| | | ||||||| ||| | Sbjct 2624 ATAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGCCGCTGGTTCGACCCCAGC 2683 Query 136776 TGGGAACA 136783 ||||| || Sbjct 2684 TGGGAGCA 2691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588971494333600