Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mitosporidium_20daphniae_20[genbank_20GCA_5F000760515.1_202014-09- 30] 612 sequences; 5,636,959 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq113 132 9e-26 >seq113 Length=5777 Score = 132 bits (146), Expect = 9e-26 Identities = 356/533 (67%), Gaps = 15/533 (3%) Strand=Plus/Plus Query 213114 ACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAG 213173 || ||||||||||| || || |||||||| | | |||||| ||||||||||| | Sbjct 3866 ACATTCCACATGTCGAATTGAAAGATGCCCTGAGAAATGGGGCTTCCCTGGTAAGACTCG 3925 Query 213174 TAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTT 213233 || | ||| | || |||||||| || ||| || || ||||| | ||| || || Sbjct 3926 TATGTACCAGTTTGCTGAGCCAGCTCACACGACTGCTCAAGAGCAGCATGGTATATTGTC 3985 Query 213234 TCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGT-GAAGGGCATCAT-CATGC 213291 |||||||||| |||| | |||| | || ||| || || ||||| | ||| | Sbjct 3986 TCAAATATCTTTATGTTCA-ATTCTCGCGCTGGAGGGCTGTCAAAAGGCATTTTGCAT-C 4043 Query 213292 GTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAG 213351 || |||| ||| || || || ||||| || || || || ||||| ||||||| || | Sbjct 4044 GTAAGAACGTATCTGCAAGACCTTGGACGCCAATTCCAATCGGTCTATGTCTCATATTTG 4103 Query 213352 A-CTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGG 213410 | | ||| |||||| | || || |||||| ||||| || || || || || Sbjct 4104 ATCGCCTAGC-CTCCTCGACAGGATAGAAGTTGACATCGATAATATTATTAAGATTTTTT 4162 Query 213411 GTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTC---C 213467 || ||||||||| |||| | ||| | | || || | | |||||| Sbjct 4163 GTTACCACTTTGGCAACAT----AATGTA-GCAT-ATCAAAATCAAAAGACCCGTCGCTT 4216 Query 213468 TGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCT 213527 | | |||| || || || ||| || ||||| ||||||| ||||| | | Sbjct 4217 TTGATAAACATCGGAAGTGCAATGGAAGCGAGGTTACAAACGGAAACCTCATCTTTTGAT 4276 Query 213528 GTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGG 213587 | ||||| ||||| || || |||| ||| || | |||||| |||||||| | || Sbjct 4277 GAGTACTGGATGATTTCTGTACACAAGTTTGAGCTTTTGATGGTCCCCAGGTTTTTTTGA 4336 Query 213588 TTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTC 213640 || |||||||||||| |||||| || |||||||||| || | ||||| || Sbjct 4337 TTAGACTTTGCGTTGCAAGAATCTTTAAAGAGCATGTATGGCGTTCCGGTTTC 4389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931525673774080