Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mitosporidium_20daphniae_20[genbank_20GCA_5F000760515.1_202014-09- 30] 612 sequences; 5,636,959 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq602 131 3e-25 >seq602 Length=19998 Score = 131 bits (144), Expect = 3e-25 Identities = 314/462 (68%), Gaps = 20/462 (4%) Strand=Plus/Minus Query 25582 CATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAAT 25641 |||||| || |||| ||||| || ||||||||||| ||||| || || || || ||| Sbjct 7285 CATTTTATCTCTCACGTTTTGGCCTTTTTTGCAGCCTCCGATGGAATTGTAAATGAAAAT 7226 Query 25642 CTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTC 25701 | | | || | ||||| ||||| | ||||| | || ||||| ||| Sbjct 7225 TTAGTTGTTCGCTTTGCTAGGGAGGTGCAAATCCCAGAGGCTCGTTTCTTTTACGGGTTC 7166 Query 25702 CAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT-GACGTACAT 25760 || || || |||||| | || |||||| ||||| || |||||||| ||| |||| Sbjct 7165 CAAATCATGATGGAAAATATCCATTCTGAGATGTATTCC---CTTCTGATTGAC--ACAT 7111 Query 25761 TACAGACGTCGCCGAGAGAGATCGGCTGT--TTGGT----GCCATCGAGCACATACCCAG 25814 | | || || ||| || || || ||| | |||||||| | || || || Sbjct 7110 -ATATTCG-CGATGAGCAGGAGCGTCTAAAATTGTTCAACGCCATCGAATATATCCCTAG 7053 Query 25815 CATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGAT--CAACAGCCAGAGCGCTACGTTT 25872 ||| | | || || ||||| |||| ||||| ||| | ||||| | | ||| Sbjct 7052 CATTGAAAAAAAAGCCAAATGGGCTTTGAACTGGATTGCAA-ATCCAGATGCCCCCTTTT 6994 Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 || || | ||||| || ||||| || || |||||||| || || ||| |||||||| Sbjct 6993 CGC-AGAGACTGGTTGCATTTGCCGCAGTTGAGGGCATATTCTTTTCCGGGTCGTTTGCA 6935 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTT-CCAACGAGCT 25991 |||||||| ||| | || || || ||||| ||||| ||||||| |||||||||| Sbjct 6934 GCCATCTTTTGGATAAAAAAGCGCGGTCTGATGCCTGGGCT-TACTTTTTCCAACGAGCT 6876 Query 25992 CATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCT 26033 ||||| || ||||||||||| || | || ||||| || || Sbjct 6875 GATCAGTAGAGACGAGGGTCTACATACCGAGTTTGCTTGTCT 6834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928837694337280