Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mitosporidium_20daphniae_20[genbank_20GCA_5F000760515.1_202014-09-
30] 612 sequences; 5,636,959 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq366 192 4e-43
seq49 120 2e-21
seq612 118 7e-21
seq33 107 1e-17
seq587 98.7 6e-15
seq594 89.7 3e-12
>seq366
Length=38039
Score = 192 bits (212), Expect = 4e-43
Identities = 388/569 (68%), Gaps = 24/569 (4%)
Strand=Plus/Minus
Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGG---T 474385
|| |||||||||||||| ||||| || ||| || || | ||| | | ||| |
Sbjct 23425 GCTATTGGTATTGATTTGGGAACCACCTACTCCTGCGTTGGTGT---CCTTATTGGAGAT 23369
Query 474386 AAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTT 474445
| || || || ||||| ||||| || || || || ||||| || || ||||| | ||
Sbjct 23368 CACGTCGAGATCATTGCAAATGATCAGGGAAACAGGACAACTCCCTCCTATGTCGCATTC 23309
Query 474446 ACTGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTT 474505
|| || ||||| | |||||| ||||||| ||| ||| |||| ||||| || || |
Sbjct 23308 ACAGACACTGAGCGTCTTATCGGAGATGGTGCCAAAAATCAGGCTGCCATGAACCCAGAA 23249
Query 474506 AATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAA 474565
||||| | || || ||||| | ||||||| ||| |||||| ||| | | ||||||
Sbjct 23248 AATACAGTCTTCGACGCTAAGCGTCTGATTGGCCGTCGTTTTGACGATCCAATTGTCCAG 23189
Query 474566 TCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAA-ACCA---TATAT 474621
||||||||| |||||||| || ||||| |||| || || |||| |
Sbjct 23188 TCTGATATGAAGCATTGGCCATTCAAGGT------CGTTGATGCCAACACCAAGCCCAAG 23135
Query 474622 AGAAGC----AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAA 474677
| ||| ||| || | | |||| || | ||| | || ||| | ||||||| |
Sbjct 23134 ATTAGCGTTGAATTCAAG--AGCGAAAAGAAGGAGTTTACTCCCGAAGAGCTTTCTTCCA 23077
Query 474678 TGGTTTTAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGG-ACAAGAAGTAACTGAT 474736
|| | | ||||||||| | || || ||||||| || || | | | || ||
Sbjct 23076 TGATCCTCATCAAAATGAAGGAGACTGCTGAAGCATATCTCGGTACTACGA-TCACCAAT 23018
Query 474737 GCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCG 474796
|| || || || ||||| || ||||| || |||||||| || |||||||| || |||||
Sbjct 23017 GCTGTGATCACGGTTCCTGCCTATTTCAACGATTCTCAGCGCCAAGCAACCAAGGATGCC 22958
Query 474797 GGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTT 474856
|| ||||| ||||| ||||| | || || || || || || || || || || |
Sbjct 22957 GGTGCTATTGCCGGTCTCAATGTGCTCCGCATCATCAACGAGCCCACCGCTGCAGCCATC 22898
Query 474857 GCTTATGGTCTTGATAAGAATTCTGACAA 474885
||||||||||| ||||| | ||||||||
Sbjct 22897 GCTTATGGTCTCGATAAACAATCTGACAA 22869
Score = 134 bits (148), Expect = 9e-26
Identities = 567/882 (64%), Gaps = 20/882 (2%)
Strand=Plus/Minus
Query 475310 GGAACTCATGACGTAACTTTACTATCACTCGAAGATGGTCTTTTCTCTGTAAGAGCAACA 475369
|| ||| ||| || |||| || || | |||| |||| | || |||| |||||
Sbjct 22831 GGTACTTTTGATGTTTCTTTGCTCTCCATGGAAGGTGGTGTCTTTGAAGTAAAGGCAACC 22772
Query 475370 GCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGTAT--CATGGTGTG 475427
||||| || | |||||||| || ||||| |||||| ||| | || ||| | ||
Sbjct 22771 GCTGGTGACACGCATCTTGGAGGAGAAGACTTTGATTCCAGAATGGTTAGCCAT--TTTG 22714
Query 475428 TTGAAGATTTCAAGAGGAAAAATAAAGTTGATCTTTCAACATCTGCTAAAGCATTAAGAC 475487
| || || |||||| | || | ||| || | || | || || | | |
Sbjct 22713 TCGAGGAATTCAAGCGCAAGCACAAAAAAGACATCTCTGGAAACGCACGTGCCATCCGCC 22654
Query 475488 GTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTG 475547
||||| | || || || || ||||||||||| | | || || || || || | |
Sbjct 22653 GTCTTCGTACAGCCTGCGAGCGTGCTAAGCGCACCTTGTCCTCAGCCACAACCGCTTCCG 22594
Query 475548 TTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAAT 475607
||||| | || ||||| ||||| || ||||||| | || || || | ||| |
Sbjct 22593 TTGAAATCGACTCTCTATTTGAGGGCATTGATTTCTACACCTCCATCACTCGTGCTCGCT 22534
Query 475608 TTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTCA 475667
|||| || |||| || ||||| | || |||| ||||| ||| | ||||| |
Sbjct 22533 TTGAGGAGCTTTGCCAGGACCTCTTCCGCTCTACGCTTGATCCCGTGGAAAAGGTTCTTA 22474
Query 475668 GAGATTCT--AAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAAC 475725
|||||| ||| | | |||||| || | |||||||| ||||| || || || ||
Sbjct 22473 AGGATTCTCAAAAGTCCAAAAATCAG--GTTGACGAAATTGTCCTTGTCGGTGGCTCCAC 22416
Query 475726 AAGAATTCCAAAAATAAGAGAAATGCT--TTCATCATATTTT-AATGGTAAAAAGTTAAA 475782
| ||||| | ||| |||| ||| | || | |||| ||||| || || | ||
Sbjct 22415 CCGCATTCCCAGAATCC-AGAA--GCTGGTGCAAGACTTTTTCAATGGAAAGGAGCTCAA 22359
Query 475783 TGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTAT--T 475840
| || | |||||||| || |||||||| ||||| || || ||||| || | || |
Sbjct 22358 CAAGAGCATCAATCCTGACGAGGCTGTTGCTTATGGTGCAGCCGTCCAGGCTTCCATCCT 22299
Query 475841 TTATCAGGTCAAT-CAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACT 475899
| || | | | | || ||| | | ||| | ||| ||| | || || |||| |
Sbjct 22298 TAATGGCGATATTTCGGAAAAGACCCAAGATA-TCTTG--CTTTTGGATGTCGCTCCCTT 22242
Query 475900 TTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCC 475959
|| | ||| | || || | ||||| | ||||| ||||| | || || |
Sbjct 22241 GTCTCTCGGTATCGAGACTGCCGGAGGTGTCATGACCCCCCTTATCACTCGCAACACAAC 22182
Query 475960 TATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAAC 476019
|| || |||||| | | ||||||||||| |||||||| || ||| | ||
Sbjct 22181 GATTCCTACGAAAAAAGCCCAGGTATTTTCCACGTATTCTGACAACCAACCCGGAGTTCT 22122
Query 476020 CATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTT 476079
|| ||| |||||||||| || | | | || ||||| ||| | || || | ||
Sbjct 22121 TATTCAAGTCTTTGAAGGCGAGCGCACCATGACCAAAGACAATCATTTGCTGGGCAAGTT 22062
Query 476080 TAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGA 476139
| | || |||||||| || || ||| | || || || |||||||| ||| | || ||
Sbjct 22061 CGAGTTGGACGGTATTCCACCAGCCCCCCGTGGTGTGCCCCAAATTGAGGTTTCATTCGA 22002
Query 476140 TATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAA 476181
|| ||||| ||||| ||||| ||||| |||| ||||||
Sbjct 22001 CATCGATGCTAATGGCATTCTCAATGTCTCTGCCGTTGATAA 21960
>seq49
Length=10291
Score = 120 bits (132), Expect = 2e-21
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 480561 AGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCT 480620
|| || ||||| || || ||||| || |||||| |||| || ||||| |||
Sbjct 9966 AGCACTAGATGGAGGGTTGACTCTTTTTGAATATTATAGTCAGAGAGCGTTCTTCCATCC 10025
Query 480621 TCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCT 480680
|| || |||||||||||||| ||||| ||||| || ||||| || |||||||| ||||||
Sbjct 10026 TCCAGCTGCTTTCCAGCAAATATAAGGCGTTGCTGGTCAGGCGGTATTCCTTCTTTGTCT 10085
Query 480681 TGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTT 480740
|| || ||||| || ||| |||||| || || | | | ||| || || || |||
Sbjct 10086 TGGATTTTTTGCTTTACATTTTCAATGGTGTCTGAAGATTCAACTTCTAGCGTGATTGTT 10145
Query 480741 TTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || || || || || ||||| |||||
Sbjct 10146 TTCCCAGTAAGTGTTTTGACGAAGATTTG 10174
>seq612
Length=74583
Score = 118 bits (130), Expect = 7e-21
Identities = 159/219 (73%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611
|||||||| || |||||||| || || || || || ||||||||||| || |||
Sbjct 29768 CGAAGACGAAGCACAAGATGGAGCGTGGACTCCTTCTGAATATTATAATCAGAGAGTGTT 29709
Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671
|| ||| ||||| || || || |||||||| || || || || || ||||||||||||
Sbjct 29708 CTTCCATCCTCAAGCTGTTTGCCTGCAAAAATCAGGCGCTGCTGGTCTGGAGGAATTCCT 29649
Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAG 480730
||||||||||| || || || || ||| ||||| || || | | | | ||| ||
Sbjct 29648 TCCTTGTCTTGGATTTTCTGCTTCACATTCTCAATGGTGTCCGAAGACTCCA-CTTCGAG 29590
Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||||| || || || || || || || || ||||||||
Sbjct 29589 CGTAATGGTCTTGCCCGTAAGTGTTTTGACAAAAATTTG 29551
>seq33
Length=72831
Score = 107 bits (118), Expect = 1e-17
Identities = 155/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| || ||||||||||||||||| ||| || || | ||| || || | || ||
Sbjct 32096 ACGGAGTCGGAGTACAAGATGAAGAGTAGACTCCTTCTGGATATTGTAGTCGGAAAGTGT 32037
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| ||| ||||| |||||||| |||||||| || || || ||||| || || |||||
Sbjct 32036 ACGTCCATCCTCAAGCTGCTTTCCGGCAAAAATCAGGCGCTGCTGATCGGGGGGGATTCC 31977
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730
||||| ||||||||||| |||||| ||||| || ||| || | || ||
Sbjct 31976 CTCCTTATCTTGAATCTTGGCCTTGACATTCTCAATGGTGTCACTGGATTCTACCTCGAG 31917
Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || || || || || || |||||||| || |||||
Sbjct 31916 AGTGATGGTCTTTCCTGTAAGGGTCTTAACAAAGATTTG 31878
>seq587
Length=23816
Score = 98.7 bits (108), Expect = 6e-15
Identities = 255/386 (66%), Gaps = 6/386 (2%)
Strand=Plus/Minus
Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAA 475852
||||| || |||||| |||| ||||| ||||| |||||||| || ||| | || || ||
Sbjct 19834 AATCCGGACGAAGCTATTGCGTATGGTGCTGCCGTCCAAGCCGCAATTATTTCGGGAGAA 19775
Query 475853 TCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTT 475912
||| || ||| | |||| || | ||||||| || ||||| | || ||
Sbjct 19774 ---GACAAGT--CTAG-TGATATCGTTTTGCTTGACGTTTGCCCTCTTTCTCTTGGCATT 19721
Query 475913 GAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAA 475972
||||| || || ||||||||| || || | ||||| || | ||||| ||||
Sbjct 19720 GAAACGACCGGTGGTGTTATGACTACGCTGATAAAAAGAAACACAGCCATCCCCAGCAAG 19661
Query 475973 AAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTT 476032
| | | ||||||||| | | ||||| || | |||||| ||| || |||
Sbjct 19660 CGTACGCAGATCTTTTCCACTGCTGCGGATAACCAGTCTACTGTAGAAATCAAAGTCTAC 19601
Query 476033 GAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGT 476092
|| || || | | | ||| ||| ||||| || || | ||| ||| ||
Sbjct 19600 GAGGGCGAGCGTACTCTTACTCGAGACAATAATCTTCTCGGTAAATTTTCGCTTTCTGGG 19541
Query 476093 ATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAAT 476152
||||| || ||||| | || ||||||||||| || || ||||||||| |||| |||
Sbjct 19540 ATTCCCCCGGCTCCGCGTGGCGTTCCTCAAATCGAGGTCGTTTTTGATATCGATGTCAAT 19481
Query 476153 GGTATTCTTAATGTTACTGCTTGTGA 476178
||| | ||| ||| | ||| | |||
Sbjct 19480 GGTGTCCTTCGTGTAAATGCCTATGA 19455
Score = 91.5 bits (100), Expect = 1e-12
Identities = 131/183 (72%), Gaps = 5/183 (3%)
Strand=Plus/Minus
Query 474737 GCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCG 474796
|| || ||||| || || |||||||| | ||| ||| ||||||||||||||||||||
Sbjct 20497 GCCGTCATTACGGTGCCTGCATATTTCACAGATAGTCAGCGTCAAGCAACTAAAGATGCA 20438
Query 474797 GGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTT 474856
||| ||||| || | || || || || |||||||| || || || ||||| ||
Sbjct 20437 GGAGTCATTGCCGGCTTGAAGGTCGATCGCATCATTAATGAGCCCACGGCTGCCGCCATT 20378
Query 474857 GCTTATGGTCTTGATAAGAATTCTGACAAAGAAG-TAAATGTTTTAATCTTTGATTGTGG 474915
|| ||||| || ||| || | ||||| || | | ||||||| | |||||| ||
Sbjct 20377 GCCTATGGACTCGATCGCAAAT----CAAAGGAGATGACTGTTTTAGTTTTTGATCTCGG 20322
Query 474916 AGG 474918
|||
Sbjct 20321 AGG 20319
>seq594
Length=21442
Score = 89.7 bits (98), Expect = 3e-12
Identities = 103/139 (74%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794
|||| || | ||||| || |||||||| |||||| | || || || || || |||||||
Sbjct 18500 ATGCCGTTGTGACTGTGCCTGCATATTTCAATGATGCCCAGCGCCAGGCCACAAAAGATG 18441
Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854
| || | ||||| || | |||| | ||| |||| ||||| || || || || || |
Sbjct 18440 CAGGTACTATTGCTGGGTTGGATGTCCTTCGTGTTATCAATGAGCCTACGGCCGCAGCTC 18381
Query 474855 TTGCTTATGGTCTTGATAA 474873
|||| ||||||||||| ||
Sbjct 18380 TTGCGTATGGTCTTGACAA 18362
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268152948350576
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |