Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mitosporidium_20daphniae_20[genbank_20GCA_5F000760515.1_202014-09- 30] 612 sequences; 5,636,959 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq113 96.9 2e-15 >seq113 Length=5777 Score = 96.9 bits (106), Expect = 2e-15 Identities = 157/221 (71%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 25888 ATTTGGACAGAATAAATGCCA-ATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTG 25946 |||||||||||| | | ||| ||| ||| |||||| ||| | ||| || | ||| | Sbjct 4522 ATTTGGACAGAAAAGAGTCCACATC-CCATCTTGCTCCACTCGTTTCATGAACAGATCGG 4580 Query 25947 GAATCCACATTGCATAAAATAAATCTCTCGCTCTCA-TTTCTTCTTTTCCGTGATTCTTT 26005 | ||||| | |||||||| | ||| || || | | || |||||||| ||| || Sbjct 4581 GTATCCATAGGGCATAAAAAAGATCCCT-GCACCGACCCTCGTCTTTTCCAAAATTTTTC 4639 Query 26006 TTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTA 26065 |||| ||| |||||||| |||| ||| | |||||| || || ||||| || ||||| Sbjct 4640 TTTAAATCCAAGAAATCGAAAACATCAGCGTGCCAGGGCTCCAAATAAATTGCAAAGGCG 4699 Query 26066 CCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGT 26106 || || ||| || |||||||| || |||| |||||| Sbjct 4700 CCAGGTCGTTTATTCCCGCCTTGATCGACATATCGTGCAGT 4740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253038112637900