Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mitosporidium_20daphniae_20[genbank_20GCA_5F000760515.1_202014-09- 30] 612 sequences; 5,636,959 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq44 84.2 3e-11 >seq44 Length=71667 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 48022 CCGTATGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAA 48081 || |||| ||| |||||||| || |||||||| || ||||| |||||||||||||| Sbjct 859 CCATATGCTTCCCGATAGTTTTTCACTATCCAATAAGAGTAGAGCTTTGCAACACCATAT 800 Query 48082 GGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAA 48141 || ||||| ||||| || || || || || | || ||| |||| || || ||| || Sbjct 799 GGTGAACGGGGATAAAATGGCGTTGTTTCGTTTTGCGGAACCTCTGTTACTTTTCCAAAA 740 Query 48142 AGTTCACTGGTGGATGCTTGA 48162 || || ||| || || ||| Sbjct 739 AGCTCGGAGGTCGAGGCCTGA 719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665489308967840