Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mitosporidium_20daphniae_20[genbank_20GCA_5F000760515.1_202014-09-
30] 612 sequences; 5,636,959 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq366 563 1e-155
seq33 206 3e-48
seq612 168 9e-37
seq49 165 1e-35
seq594 141 1e-28
seq598 87.8 2e-12
seq587 87.8 2e-12
>seq366
Length=38039
Score = 563 bits (624), Expect = 1e-155
Identities = 1105/1607 (69%), Gaps = 56/1607 (3%)
Strand=Plus/Minus
Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGT----ATGGCAAAATGA 195354
||||||||||| ||||| ||||| || ||||| || |||||||| || | | ||
Sbjct 23425 GCTATTGGTATTGATTTGGGAACCACCTACTCCTGCGTTGGTGTCCTTATTGGA----GA 23370
Query 195355 TCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTT 195414
|| || ||||| || | ||||| || |||||| | |||||||| || || || || ||
Sbjct 23369 TCACGTCGAGATCATTGCAAATGATCAGGGAAACAGGACAACTCCCTCCTATGTCGCATT 23310
Query 195415 TACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTAT 195474
||||| | ||| ||||| | ||||||| || ||||||||| | || ||||||||
Sbjct 23309 CACAGACACTGAGCGTCTTATCGGAGATGGTGCCAAAAATCAGGCTGCCATGAACCCAGA 23250
Query 195475 CAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCA 195534
||||| ||||| ||||| |||||||| ||||| || ||| ||| | |||||
Sbjct 23249 AAATACAGTCTTCGACGCTAAGCGTCTGATTGGCCGTCGTTTTGACGATCCAATTGTCCA 23190
Query 195535 AGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATA---AGCCTAT 195591
||||| ||| | ||| | | | ||| | || || || | | |||| |
Sbjct 23189 GTCTGATATGAAGCATTGGCCAT-TCAAGGT-----CGTTGATGCCAACACCAAGCCCAA 23136
Query 195592 GATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTAT 195651
||||| |||||||| | | || ||||| | ||| |||||||||| |||| || ||
Sbjct 23135 GATTAGCGTTGAATTCAAGAGCGAAAAGAAGGAGTTTACTCCCGAAGAGCTTTCTTCCAT 23076
Query 195652 GGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGC 195711
| | | || || |||||||||||||| ||| | | | |||| || | | ||||
Sbjct 23075 GATCCTCATCAAAATGAAGGAGACTGCTGAAGCATATCTCGGTACTACGATCACCAATGC 23016
Query 195712 AGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGC 195771
|| | || || ||||| || |||| ||||| || || || || || ||||| || |
Sbjct 23015 TGTGATCACGGTTCCTGCCTATTTCAACGATTCTCAGCGCCAAGCAACCAAGGATGCCGG 22956
Query 195772 TGCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTG 195830
||||||||| ||||| || ||| || | || ||||| || || || || || || || |
Sbjct 22955 TGCTATTGCCGGTCTCAA-TGTGCTCCGCATCATCAACGAGCCCACCGCTGCAGCCATCG 22897
Query 195831 CTTATGGTCTGGACAAGAACAA--GGACGAAGATAAA----AATGTATTGATCTTTGATC 195884
|||||||||| || | ||||| ||| |||| | | ||| |||||||||||
Sbjct 22896 CTTATGGTCTCGATA--AACAATCTGAC-AAGACCGAGCGTATTGTGCTGATCTTTGATT 22840
Query 195885 TCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAA 195944
| ||||||||||| |||||||| || | ||| || ||||||||| | || |||||||
Sbjct 22839 TGGGTGGTGGTACTTTTGATGTTTCTTTGCTCTCCATGGAAGGTGGTGTCTTTGAAGTAA 22780
Query 195945 AGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTC 196004
|||| || |||||||| || ||||| || || ||||| || ||| | | | | | |
Sbjct 22779 AGGCAACCGCTGGTGACACGCATCTTGGAGGAGAAGACTTTGATTCCAGAATGGTTAGCC 22720
Query 196005 A-TTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCT 196063
| |||||| || || ||| || ||| | || ||||| || |||||||| | | ||
Sbjct 22719 ATTTTGTC-GAGGAATTCAAGCGCAAGCACAAAAAAGACATCTCTGGAAACGCACGTGCC 22661
Query 196064 CTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAA 196123
| || || ||| | || || || || ||||| || || || || | | || | | |||
Sbjct 22660 ATCCGCCGTCTTCGTACAGCCTGCGAGCGTGCTAAGCGCAC-CT-TGTCCTCAGCCACAA 22603
Query 196124 ACAAT--GGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCC 196181
| | ||||| || || || | ||||| || ||||| ||||| || | || || |
Sbjct 22602 CCGCTTCCGTTGAAATCGACTCTCTATTTGAGGGCATTGATTTCTACACCTCCATCACTC 22543
Query 196182 GTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTA---TGGAACCTGTTG 196238
|||| || ||||| ||| | | || | || | | || | || || || |
Sbjct 22542 GTGCTCGCTTTGAGGAGCTTTGCCAGGACCTCTTCCG---CTCTACGCTTGATCCCGTGG 22486
Query 196239 AACAAGTACTTCGTGA--CGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGT 196296
|| | || ||| || | |||| | | || || ||||||| ||||||||||||||
Sbjct 22485 AAAAGGTTCTTAAGGATTCTCAAAAGTCCAAAAATC--AGGTTGACGAAATTGTCCTTGT 22428
Query 196297 GGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCT--TTCTAG-CTTCTTCAATAA 196353
|| || || ||||| ||||| ||| || |||| ||| | | || ||| ||||||
Sbjct 22427 CGGTGGCTCCACCCGCATTCC-CAGAATC--CAGAAGCTGGTGCAAGACTTTTTCAATGG 22371
Query 196354 TAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCA 196413
|| || | ||||| | ||||| || || || || |||||||||||||| ||||| ||
Sbjct 22370 AAAGGAGCTCAACAAGAGCATCAATCCTGACGAGGCTGTTGCTTATGGTGCAGCCGTCCA 22311
Query 196414 GGCTGCTATTCTCTCAGGTGTTGACAAT---AATAACGTCCAAGATCTTCTGCTACTTGA 196470
|||| | || || | | || || | | | || ||||||| | |||| | ||
Sbjct 22310 GGCTTCCATCCT-TAA--TGGCGATATTTCGGAAAAGACCCAAGATATCTTGCTTTTGGA 22254
Query 196471 TGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGA 196530
||| || ||| | || || ||| | || || || || ||||| ||||| ||||
Sbjct 22253 TGTCGCTCCCTTGTCTCTCGGTATCGAGACTGCCGGAGGTGTCATGACCCCCCTTATCAC 22194
Query 196531 TAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCA 196590
| | |||||||| ||||| || || || | || || ||||| |||||||| || || ||
Sbjct 22193 TCGCAACACAACGATTCCTACGAAAAAAGCCCAGGTATTTTCCACGTATTCTGACAACCA 22134
Query 196591 ACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCT 196650
||| || |||| ||||||||| | |||||| || ||| || | || || || ||| |
Sbjct 22133 ACCCGGAGTTCTTATTCAAGTCTTTGAAGGCGAGCGCACCATGACCAAAGACAATCATTT 22074
Query 196651 ACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAA 196710
|| || | ||||| ||| || |||||| | || ||| | ||||| || || ||| |
Sbjct 22073 GCTGGGCAAGTTCGAGTTGGACGGTATTCCACCAGCCCCCCGTGGTGTGCCCCAAATTGA 22014
Query 196711 TGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTC 196770
|||| ||||| || || || ||||| ||||| || ||| | || | || ||| | |
Sbjct 22013 GGTTTCATTCGACATCGATGCTAATGGCATTCTCAATGTCTCTGCCGTTGATAAGACCAC 21954
Query 196771 TGGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAAT 196830
|| ||| | ||||| || || ||||| || ||||| || ||||| ||||| |||||
Sbjct 21953 CGGTCGCTCTAACAAGATCGTTATCACCAACGATAAGGGCCGTCTTTCCAAGGATGAAAT 21894
Query 196831 TGAACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAGG 196877
||| || ||| || || || ||||||| | | ||||||| ||||
Sbjct 21893 TGAGCGCATGATTAGCGAAGCCGAAAAGTTCCGCAAAGAAGATGAGG 21847
>seq33
Length=72831
Score = 206 bits (228), Expect = 3e-48
Identities = 183/229 (80%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
|||||||||||||| || |||||||| ||||| || ||||| |||||||| || ||
Sbjct 31875 ATGCAAATCTTTGTTAAGACCCTTACAGGAAAGACCATCACTCTCGAGGTAGAATCCAGT 31934
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| || || || |||| |||||||||||||||||||| || || || |||||||||
Sbjct 31935 GACACCATTGAGAATGTCAAGGCCAAGATTCAAGATAAGGAGGGAATCCCCCCCGATCAG 31994
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| || || |||||||| || || |||||||| ||||||||||| || | || |||||
Sbjct 31995 CAGCGCCTGATTTTTGCCGGAAAGCAGCTTGAGGATGGACGTACACTTTCCGACTACAAT 32054
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTG 172090
| || |||||||||||||| || ||||| || | || || |||||||
Sbjct 32055 ATCCAGAAGGAGTCTACTCTTCATCTTGTACTCCGACTCCGTGGTGGTG 32103
>seq612
Length=74583
Score = 168 bits (186), Expect = 9e-37
Identities = 179/236 (76%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
|||||||| ||||| ||||| ||||| || || || || || ||||| || ||||| ||
Sbjct 29548 ATGCAAATTTTTGTCAAAACACTTACGGGCAAGACCATTACGCTCGAAGTGGAGTCTTCG 29607
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| || || || | || || || ||||| |||||||| ||||| || || |||
Sbjct 29608 GACACCATTGAGAATGTGAAGCAGAAAATCCAAGACAAGGAAGGAATTCCTCCAGACCAG 29667
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| || || |||||||| || ||||||||||| |||||| | || ||| ||||||| ||
Sbjct 29668 CAGCGCCTGATTTTTGCAGGCAAACAGCTTGAGGATGGAAGAACACTCTCTGATTATAAT 29727
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTGCAACCGA 172097
|||| |||||||| || || || ||||| || | ||||| || || || | |||
Sbjct 29728 ATTCAGAAGGAGTCCACGCTCCATCTTGTGCTTCGTCTTCGCGGAGGAGCCATCGA 29783
>seq49
Length=10291
Score = 165 bits (182), Expect = 1e-35
Identities = 175/228 (77%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||||||||| || ||||| |||||||| ||||| ||||| || || ||||| || |||
Sbjct 10177 ATGCAAATCTTCGTCAAAACACTTACTGGGAAAACAATCACGCTAGAAGTTGAATCTTCA 10118
Query 171922 GACACAATCGATAACATCAAAGC-CAAGATTCAAGATAAGGAAGGCATTCCACCCGATCA 171980
||||| || || || | ||||| || || ||||| || ||||| || || || || ||
Sbjct 10117 GACACCATTGAAAATGT-AAAGCAAAAAATCCAAGACAAAGAAGGAATACCGCCTGACCA 10059
Query 171981 GCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAA 172040
|||||| ||||| |||||||| || ||||| || |||||| | || ||| |||| || ||
Sbjct 10058 GCAACGCCTTATATTTGCTGGAAAGCAGCTGGAGGATGGAAGAACGCTCTCTGACTATAA 9999
Query 172041 CGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088
||||||| ||||| || || || || || || || || || || ||
Sbjct 9998 TATTCAAAAAGAGTCAACCCTCCATCTAGTGCTGAGACTGCGAGGAGG 9951
>seq594
Length=21442
Score = 141 bits (156), Expect = 1e-28
Identities = 231/327 (71%), Gaps = 8/327 (2%)
Strand=Plus/Minus
Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721
||||||||||| ||||| ||| | |||||| || | | || |||| |||||||||
Sbjct 18546 AAGATGAAGGAAACTGCAGAACAATACATGGGAAAGCCCATAAAGAATGCCGTTGTGACT 18487
Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781
|| ||||| || |||| |||| | || || ||||| ||||| || || | | |||||||
Sbjct 18486 GTGCCTGCATATTTCAATGATGCCCAGCGCCAGGCCACAAAAGATGCAGGTACTATTGCT 18427
Query 195782 GGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCT 195840
|| | | ||| ||| | |||||||||| || || || || || |||| ||||||||
Sbjct 18426 GGGTTGGA-TGTCCTTCGTGTTATCAATGAGCCTACGGCCGCAGCTCTTGCGTATGGTCT 18368
Query 195841 GGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTT 195900
||||| ||| | ||| | | || | | ||| || || || ||||| ||
Sbjct 18367 TGACAA-AAC--TGGCGACCGCACCA---TAGCTGTTTATGACCTTGGAGGCGGTACCTT 18314
Query 195901 TGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGA 195960
||| | || |||| | || || ||| | ||||| |||||| |||| ||| ||
Sbjct 18313 TGACATTTCCATTCTGGAAATACAAAATGGCGTTTTCGAGGTAAAGTCTACCAATGGAGA 18254
Query 195961 TACTCATCTAGGTGGTGAAGATTTCGA 195987
||| ||||| |||||||||||||||||
Sbjct 18253 TACCCATCTTGGTGGTGAAGATTTCGA 18227
>seq598
Length=20540
Score = 87.8 bits (96), Expect = 2e-12
Identities = 132/185 (71%), Gaps = 2/185 (1%)
Strand=Plus/Plus
Query 182919 GCATCTCGGACATTCTTACACTTTCCC-CGAAGTGGAAAGACGCCGTAATGATCCCTTCC 182977
||||| || |||||| | | |||||| ||||| ||| | || || ||| |||||||||
Sbjct 19466 GCATCGCGCACATTCAAA-AGTTTCCCACGAAGCGGATAAACTCCAAAATAATCCCTTCC 19524
Query 182978 AACAACAGAGAGGCCAGCGACAGCGAGTGTCTTTGCCGAGTCACCCTCTGTCACGATGAG 183037
||| || |||||||||| || || || | |||||| || || || || |||| |||||
Sbjct 19525 AACTACGGAGAGGCCAGAAACTGCCAGGGCCTTTGCAGAATCTCCTTCAGTCAAAATGAG 19584
Query 183038 TGTACACTTAGAAGATTGGGCTGTCCCAGCTTTGTTTGCGTCATCAAGCTTGGGAATACC 183097
||||| || || | ||| ||||| || || ||||| || || || || ||
Sbjct 19585 AGTACATTTTGAGGCGCTTTTTGTTCCAGCAAAATTGGCATCATCCAGTTTTGGTATCCC 19644
Query 183098 AGTAA 183102
|| ||
Sbjct 19645 AGAAA 19649
>seq587
Length=23816
Score = 87.8 bits (96), Expect = 2e-12
Identities = 249/377 (66%), Gaps = 12/377 (3%)
Strand=Plus/Minus
Query 196175 ATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCT 196234
|| |||||||| || |||||||| |||| ||| | || | |||| | | | ||
Sbjct 20035 ATCACCCGTGCTCGCTTTGAAGATCTAAATCGCGATCTCTTCATGAAGACTTTAAAGCCG 19976
Query 196235 GTTGAACAAGTACTTCGTGACGCAAAG--ATGGATAAGTCTAAGGTTGATGAAATTGTCC 196292
|||| ||||| | ||||||||| || | ||| || |||||||| ||||
Sbjct 19975 GTTGCCCAAGTTTTGGAAGACGCAAAGGTATCCAAAAGC--AATGTTGATGAGGTTGTGT 19918
Query 196293 TTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAG-CTTCTTCAAT 196351
| || || || ||||| || ||||| | ||| |||| || | || ||| |||||
Sbjct 19917 TGGTCGGTGGCTCAACTCGAATTCCTTTTGTACAAAAGATTCTG-CAAGACTTTTTCAAC 19859
Query 196352 AATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTT 196411
|| | | |||||| ||||| ||||| ||||| |||| |||||||| |||||
Sbjct 19858 GGAAAGAAACTCAACAAAGACATCAATCCGGACGAAGCTATTGCGTATGGTGCTGCCGTC 19799
Query 196412 CAGGCTGCTATTCTCTCAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGAT 196471
|| || || ||| | || || | ||||| || | | ||| | | | |||||
Sbjct 19798 CAAGCCGCAATTATTTCGGGAGAAGACAAGTCTAGTG----ATATCGTTT--TGCTTGAC 19745
Query 196472 GTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGAT 196531
||| || | || || || ||||||| | |||||||||||||||| | || |
Sbjct 19744 GTTTGCCCTCTTTCTCTTGGCATTGAAACGACCGGTGGTGTTATGACTACGCTGATAAAA 19685
Query 196532 AGGAACACAACTATTCC 196548
|| |||||| | || ||
Sbjct 19684 AGAAACACAGCCATCCC 19668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657857367352640
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