Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mitosporidium_20daphniae_20[genbank_20GCA_5F000760515.1_202014-09- 30] 612 sequences; 5,636,959 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq366 563 1e-155 seq33 206 3e-48 seq612 168 9e-37 seq49 165 1e-35 seq594 141 1e-28 seq598 87.8 2e-12 seq587 87.8 2e-12 >seq366 Length=38039 Score = 563 bits (624), Expect = 1e-155 Identities = 1105/1607 (69%), Gaps = 56/1607 (3%) Strand=Plus/Minus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGT----ATGGCAAAATGA 195354 ||||||||||| ||||| ||||| || ||||| || |||||||| || | | || Sbjct 23425 GCTATTGGTATTGATTTGGGAACCACCTACTCCTGCGTTGGTGTCCTTATTGGA----GA 23370 Query 195355 TCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTT 195414 || || ||||| || | ||||| || |||||| | |||||||| || || || || || Sbjct 23369 TCACGTCGAGATCATTGCAAATGATCAGGGAAACAGGACAACTCCCTCCTATGTCGCATT 23310 Query 195415 TACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTAT 195474 ||||| | ||| ||||| | ||||||| || ||||||||| | || |||||||| Sbjct 23309 CACAGACACTGAGCGTCTTATCGGAGATGGTGCCAAAAATCAGGCTGCCATGAACCCAGA 23250 Query 195475 CAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCA 195534 ||||| ||||| ||||| |||||||| ||||| || ||| ||| | ||||| Sbjct 23249 AAATACAGTCTTCGACGCTAAGCGTCTGATTGGCCGTCGTTTTGACGATCCAATTGTCCA 23190 Query 195535 AGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATA---AGCCTAT 195591 ||||| ||| | ||| | | | ||| | || || || | | |||| | Sbjct 23189 GTCTGATATGAAGCATTGGCCAT-TCAAGGT-----CGTTGATGCCAACACCAAGCCCAA 23136 Query 195592 GATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTAT 195651 ||||| |||||||| | | || ||||| | ||| |||||||||| |||| || || Sbjct 23135 GATTAGCGTTGAATTCAAGAGCGAAAAGAAGGAGTTTACTCCCGAAGAGCTTTCTTCCAT 23076 Query 195652 GGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGC 195711 | | | || || |||||||||||||| ||| | | | |||| || | | |||| Sbjct 23075 GATCCTCATCAAAATGAAGGAGACTGCTGAAGCATATCTCGGTACTACGATCACCAATGC 23016 Query 195712 AGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGC 195771 || | || || ||||| || |||| ||||| || || || || || ||||| || | Sbjct 23015 TGTGATCACGGTTCCTGCCTATTTCAACGATTCTCAGCGCCAAGCAACCAAGGATGCCGG 22956 Query 195772 TGCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTG 195830 ||||||||| ||||| || ||| || | || ||||| || || || || || || || | Sbjct 22955 TGCTATTGCCGGTCTCAA-TGTGCTCCGCATCATCAACGAGCCCACCGCTGCAGCCATCG 22897 Query 195831 CTTATGGTCTGGACAAGAACAA--GGACGAAGATAAA----AATGTATTGATCTTTGATC 195884 |||||||||| || | ||||| ||| |||| | | ||| ||||||||||| Sbjct 22896 CTTATGGTCTCGATA--AACAATCTGAC-AAGACCGAGCGTATTGTGCTGATCTTTGATT 22840 Query 195885 TCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAA 195944 | ||||||||||| |||||||| || | ||| || ||||||||| | || ||||||| Sbjct 22839 TGGGTGGTGGTACTTTTGATGTTTCTTTGCTCTCCATGGAAGGTGGTGTCTTTGAAGTAA 22780 Query 195945 AGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTC 196004 |||| || |||||||| || ||||| || || ||||| || ||| | | | | | | Sbjct 22779 AGGCAACCGCTGGTGACACGCATCTTGGAGGAGAAGACTTTGATTCCAGAATGGTTAGCC 22720 Query 196005 A-TTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCT 196063 | |||||| || || ||| || ||| | || ||||| || |||||||| | | || Sbjct 22719 ATTTTGTC-GAGGAATTCAAGCGCAAGCACAAAAAAGACATCTCTGGAAACGCACGTGCC 22661 Query 196064 CTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAA 196123 | || || ||| | || || || || ||||| || || || || | | || | | ||| Sbjct 22660 ATCCGCCGTCTTCGTACAGCCTGCGAGCGTGCTAAGCGCAC-CT-TGTCCTCAGCCACAA 22603 Query 196124 ACAAT--GGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCC 196181 | | ||||| || || || | ||||| || ||||| ||||| || | || || | Sbjct 22602 CCGCTTCCGTTGAAATCGACTCTCTATTTGAGGGCATTGATTTCTACACCTCCATCACTC 22543 Query 196182 GTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTA---TGGAACCTGTTG 196238 |||| || ||||| ||| | | || | || | | || | || || || | Sbjct 22542 GTGCTCGCTTTGAGGAGCTTTGCCAGGACCTCTTCCG---CTCTACGCTTGATCCCGTGG 22486 Query 196239 AACAAGTACTTCGTGA--CGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGT 196296 || | || ||| || | |||| | | || || ||||||| |||||||||||||| Sbjct 22485 AAAAGGTTCTTAAGGATTCTCAAAAGTCCAAAAATC--AGGTTGACGAAATTGTCCTTGT 22428 Query 196297 GGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCT--TTCTAG-CTTCTTCAATAA 196353 || || || ||||| ||||| ||| || |||| ||| | | || ||| |||||| Sbjct 22427 CGGTGGCTCCACCCGCATTCC-CAGAATC--CAGAAGCTGGTGCAAGACTTTTTCAATGG 22371 Query 196354 TAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCA 196413 || || | ||||| | ||||| || || || || |||||||||||||| ||||| || Sbjct 22370 AAAGGAGCTCAACAAGAGCATCAATCCTGACGAGGCTGTTGCTTATGGTGCAGCCGTCCA 22311 Query 196414 GGCTGCTATTCTCTCAGGTGTTGACAAT---AATAACGTCCAAGATCTTCTGCTACTTGA 196470 |||| | || || | | || || | | | || ||||||| | |||| | || Sbjct 22310 GGCTTCCATCCT-TAA--TGGCGATATTTCGGAAAAGACCCAAGATATCTTGCTTTTGGA 22254 Query 196471 TGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGA 196530 ||| || ||| | || || ||| | || || || || ||||| ||||| |||| Sbjct 22253 TGTCGCTCCCTTGTCTCTCGGTATCGAGACTGCCGGAGGTGTCATGACCCCCCTTATCAC 22194 Query 196531 TAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCA 196590 | | |||||||| ||||| || || || | || || ||||| |||||||| || || || Sbjct 22193 TCGCAACACAACGATTCCTACGAAAAAAGCCCAGGTATTTTCCACGTATTCTGACAACCA 22134 Query 196591 ACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCT 196650 ||| || |||| ||||||||| | |||||| || ||| || | || || || ||| | Sbjct 22133 ACCCGGAGTTCTTATTCAAGTCTTTGAAGGCGAGCGCACCATGACCAAAGACAATCATTT 22074 Query 196651 ACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAA 196710 || || | ||||| ||| || |||||| | || ||| | ||||| || || ||| | Sbjct 22073 GCTGGGCAAGTTCGAGTTGGACGGTATTCCACCAGCCCCCCGTGGTGTGCCCCAAATTGA 22014 Query 196711 TGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTC 196770 |||| ||||| || || || ||||| ||||| || ||| | || | || ||| | | Sbjct 22013 GGTTTCATTCGACATCGATGCTAATGGCATTCTCAATGTCTCTGCCGTTGATAAGACCAC 21954 Query 196771 TGGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAAT 196830 || ||| | ||||| || || ||||| || ||||| || ||||| ||||| ||||| Sbjct 21953 CGGTCGCTCTAACAAGATCGTTATCACCAACGATAAGGGCCGTCTTTCCAAGGATGAAAT 21894 Query 196831 TGAACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAGG 196877 ||| || ||| || || || ||||||| | | ||||||| |||| Sbjct 21893 TGAGCGCATGATTAGCGAAGCCGAAAAGTTCCGCAAAGAAGATGAGG 21847 >seq33 Length=72831 Score = 206 bits (228), Expect = 3e-48 Identities = 183/229 (80%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||||||||| || |||||||| ||||| || ||||| |||||||| || || Sbjct 31875 ATGCAAATCTTTGTTAAGACCCTTACAGGAAAGACCATCACTCTCGAGGTAGAATCCAGT 31934 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || |||| |||||||||||||||||||| || || || ||||||||| Sbjct 31935 GACACCATTGAGAATGTCAAGGCCAAGATTCAAGATAAGGAGGGAATCCCCCCCGATCAG 31994 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || |||||||| || || |||||||| ||||||||||| || | || ||||| Sbjct 31995 CAGCGCCTGATTTTTGCCGGAAAGCAGCTTGAGGATGGACGTACACTTTCCGACTACAAT 32054 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTG 172090 | || |||||||||||||| || ||||| || | || || ||||||| Sbjct 32055 ATCCAGAAGGAGTCTACTCTTCATCTTGTACTCCGACTCCGTGGTGGTG 32103 >seq612 Length=74583 Score = 168 bits (186), Expect = 9e-37 Identities = 179/236 (76%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||| ||||| ||||| ||||| || || || || || ||||| || ||||| || Sbjct 29548 ATGCAAATTTTTGTCAAAACACTTACGGGCAAGACCATTACGCTCGAAGTGGAGTCTTCG 29607 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || | || || || ||||| |||||||| ||||| || || ||| Sbjct 29608 GACACCATTGAGAATGTGAAGCAGAAAATCCAAGACAAGGAAGGAATTCCTCCAGACCAG 29667 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || |||||||| || ||||||||||| |||||| | || ||| ||||||| || Sbjct 29668 CAGCGCCTGATTTTTGCAGGCAAACAGCTTGAGGATGGAAGAACACTCTCTGATTATAAT 29727 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTGCAACCGA 172097 |||| |||||||| || || || ||||| || | ||||| || || || | ||| Sbjct 29728 ATTCAGAAGGAGTCCACGCTCCATCTTGTGCTTCGTCTTCGCGGAGGAGCCATCGA 29783 >seq49 Length=10291 Score = 165 bits (182), Expect = 1e-35 Identities = 175/228 (77%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||||||||| || ||||| |||||||| ||||| ||||| || || ||||| || ||| Sbjct 10177 ATGCAAATCTTCGTCAAAACACTTACTGGGAAAACAATCACGCTAGAAGTTGAATCTTCA 10118 Query 171922 GACACAATCGATAACATCAAAGC-CAAGATTCAAGATAAGGAAGGCATTCCACCCGATCA 171980 ||||| || || || | ||||| || || ||||| || ||||| || || || || || Sbjct 10117 GACACCATTGAAAATGT-AAAGCAAAAAATCCAAGACAAAGAAGGAATACCGCCTGACCA 10059 Query 171981 GCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAA 172040 |||||| ||||| |||||||| || ||||| || |||||| | || ||| |||| || || Sbjct 10058 GCAACGCCTTATATTTGCTGGAAAGCAGCTGGAGGATGGAAGAACGCTCTCTGACTATAA 9999 Query 172041 CGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 ||||||| ||||| || || || || || || || || || || || Sbjct 9998 TATTCAAAAAGAGTCAACCCTCCATCTAGTGCTGAGACTGCGAGGAGG 9951 >seq594 Length=21442 Score = 141 bits (156), Expect = 1e-28 Identities = 231/327 (71%), Gaps = 8/327 (2%) Strand=Plus/Minus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 ||||||||||| ||||| ||| | |||||| || | | || |||| ||||||||| Sbjct 18546 AAGATGAAGGAAACTGCAGAACAATACATGGGAAAGCCCATAAAGAATGCCGTTGTGACT 18487 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || ||||| || |||| |||| | || || ||||| ||||| || || | | ||||||| Sbjct 18486 GTGCCTGCATATTTCAATGATGCCCAGCGCCAGGCCACAAAAGATGCAGGTACTATTGCT 18427 Query 195782 GGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCT 195840 || | | ||| ||| | |||||||||| || || || || || |||| |||||||| Sbjct 18426 GGGTTGGA-TGTCCTTCGTGTTATCAATGAGCCTACGGCCGCAGCTCTTGCGTATGGTCT 18368 Query 195841 GGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTT 195900 ||||| ||| | ||| | | || | | ||| || || || ||||| || Sbjct 18367 TGACAA-AAC--TGGCGACCGCACCA---TAGCTGTTTATGACCTTGGAGGCGGTACCTT 18314 Query 195901 TGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGA 195960 ||| | || |||| | || || ||| | ||||| |||||| |||| ||| || Sbjct 18313 TGACATTTCCATTCTGGAAATACAAAATGGCGTTTTCGAGGTAAAGTCTACCAATGGAGA 18254 Query 195961 TACTCATCTAGGTGGTGAAGATTTCGA 195987 ||| ||||| ||||||||||||||||| Sbjct 18253 TACCCATCTTGGTGGTGAAGATTTCGA 18227 >seq598 Length=20540 Score = 87.8 bits (96), Expect = 2e-12 Identities = 132/185 (71%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 182919 GCATCTCGGACATTCTTACACTTTCCC-CGAAGTGGAAAGACGCCGTAATGATCCCTTCC 182977 ||||| || |||||| | | |||||| ||||| ||| | || || ||| ||||||||| Sbjct 19466 GCATCGCGCACATTCAAA-AGTTTCCCACGAAGCGGATAAACTCCAAAATAATCCCTTCC 19524 Query 182978 AACAACAGAGAGGCCAGCGACAGCGAGTGTCTTTGCCGAGTCACCCTCTGTCACGATGAG 183037 ||| || |||||||||| || || || | |||||| || || || || |||| ||||| Sbjct 19525 AACTACGGAGAGGCCAGAAACTGCCAGGGCCTTTGCAGAATCTCCTTCAGTCAAAATGAG 19584 Query 183038 TGTACACTTAGAAGATTGGGCTGTCCCAGCTTTGTTTGCGTCATCAAGCTTGGGAATACC 183097 ||||| || || | ||| ||||| || || ||||| || || || || || Sbjct 19585 AGTACATTTTGAGGCGCTTTTTGTTCCAGCAAAATTGGCATCATCCAGTTTTGGTATCCC 19644 Query 183098 AGTAA 183102 || || Sbjct 19645 AGAAA 19649 >seq587 Length=23816 Score = 87.8 bits (96), Expect = 2e-12 Identities = 249/377 (66%), Gaps = 12/377 (3%) Strand=Plus/Minus Query 196175 ATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCT 196234 || |||||||| || |||||||| |||| ||| | || | |||| | | | || Sbjct 20035 ATCACCCGTGCTCGCTTTGAAGATCTAAATCGCGATCTCTTCATGAAGACTTTAAAGCCG 19976 Query 196235 GTTGAACAAGTACTTCGTGACGCAAAG--ATGGATAAGTCTAAGGTTGATGAAATTGTCC 196292 |||| ||||| | ||||||||| || | ||| || |||||||| |||| Sbjct 19975 GTTGCCCAAGTTTTGGAAGACGCAAAGGTATCCAAAAGC--AATGTTGATGAGGTTGTGT 19918 Query 196293 TTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAG-CTTCTTCAAT 196351 | || || || ||||| || ||||| | ||| |||| || | || ||| ||||| Sbjct 19917 TGGTCGGTGGCTCAACTCGAATTCCTTTTGTACAAAAGATTCTG-CAAGACTTTTTCAAC 19859 Query 196352 AATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTT 196411 || | | |||||| ||||| ||||| ||||| |||| |||||||| ||||| Sbjct 19858 GGAAAGAAACTCAACAAAGACATCAATCCGGACGAAGCTATTGCGTATGGTGCTGCCGTC 19799 Query 196412 CAGGCTGCTATTCTCTCAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGAT 196471 || || || ||| | || || | ||||| || | | ||| | | | ||||| Sbjct 19798 CAAGCCGCAATTATTTCGGGAGAAGACAAGTCTAGTG----ATATCGTTT--TGCTTGAC 19745 Query 196472 GTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGAT 196531 ||| || | || || || ||||||| | |||||||||||||||| | || | Sbjct 19744 GTTTGCCCTCTTTCTCTTGGCATTGAAACGACCGGTGGTGTTATGACTACGCTGATAAAA 19685 Query 196532 AGGAACACAACTATTCC 196548 || |||||| | || || Sbjct 19684 AGAAACACAGCCATCCC 19668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657857367352640