Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mitosporidium_20daphniae_20[genbank_20GCA_5F000760515.1_202014-09- 30] 612 sequences; 5,636,959 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq77 96.9 1e-14 seq532 84.2 6e-11 seq222 84.2 6e-11 >seq77 Length=69022 Score = 96.9 bits (106), Expect = 1e-14 Identities = 163/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 251425 CACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGAT 251484 || |||||||| | || |||||||| ||||| | ||||| |||| || || | Sbjct 44893 CAAACATGGACACGATAGGCATCAGAAACGTCAAAGAGCCGCTCCTTCAAAAATGCAGCT 44834 Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 || || |||| ||||||||||| |||||||| ||||| || || | || |||||||| Sbjct 44833 GCGCCATGTGCGATCATACAATCGCGCTCCATCTCACCAAACCGCAACCCTCCATCGCGG 44774 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604 | | |||||| | ||||| | |||||| | | || || | | || ||| Sbjct 44773 GATCGACCCTCTACCGGCTGTCTGGTGAGAATCTGAACGGGCCCCCTTGCTCGAGCATGG 44714 Query 251605 TGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGAT 251660 ||||||| ||||| ||||| | ||||| ||| | | ||| || |||||||| Sbjct 44713 ATTTTATCATCAACCATGTGCTTCAAGCGCTGATAGTACGTGGGCCCAATGAAGAT 44658 >seq532 Length=29387 Score = 84.2 bits (92), Expect = 6e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 301864 ACACCAGCAAAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGT 301923 ||||| || |||||||| || || || || | ||| || | ||||| ||||| |||| Sbjct 25386 ACACCTGCCAAGTGGAACGTGTTTAGCGTCATTTGTGTTGCAGGCTCGCCAATCGATTGT 25445 Query 301924 GCCGCAATCATACCAACCATTTCTCCTGGTGCTACA 301959 || ||||| | |||||||||||||||||| |||||| Sbjct 25446 GCGGCAATGACACCAACCATTTCTCCTGGGGCTACA 25481 >seq222 Length=104519 Score = 84.2 bits (92), Expect = 6e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 301864 ACACCAGCAAAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGT 301923 ||||| || |||||||| || || || || | ||| || | ||||| ||||| |||| Sbjct 102477 ACACCTGCCAAGTGGAACGTGTTTAGCGTCATTTGTGTTGCAGGCTCGCCAATCGATTGT 102418 Query 301924 GCCGCAATCATACCAACCATTTCTCCTGGTGCTACA 301959 || ||||| | |||||||||||||||||| |||||| Sbjct 102417 GCGGCAATGACACCAACCATTTCTCCTGGGGCTACA 102382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471806059110244