Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mitosporidium_20daphniae_20[genbank_20GCA_5F000760515.1_202014-09- 30] 612 sequences; 5,636,959 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq612 116 4e-21 >seq612 Length=74583 Score = 116 bits (128), Expect = 4e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||| ||||| ||||| ||||| | || ||||| ||||| ||||| Sbjct 29744 GTGGACTCCTTCTGAATATTATAATCAGAGAGTGTTCTTCCATCCTCAAGCTGTTTGCCT 29685 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || |||| || ||||||||||| ||||| || ||||||||||| ||| || ||||| Sbjct 29684 GCAAAAATCAGGCGCTGCTGGTCTGGAGGAATTCCTTCCTTGTCTTGGATTTTCTGCTTC 29625 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | ||||| ||||| | | |||||| |||| || | ||| ||||| || || ||| Sbjct 29624 ACATTCTCAATGGTGTCCGAAGACTCCACTTCGAGCGTAATGGTCTTGCCCGTAAGTGTT 29565 Query 133644 TTTACGAAAATCTGCAT 133660 || || ||||| ||||| Sbjct 29564 TTGACAAAAATTTGCAT 29548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483417101830880