Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mitosporidium_20daphniae_20[genbank_20GCA_5F000760515.1_202014-09- 30] 612 sequences; 5,636,959 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq49 82.4 7e-11 >seq49 Length=10291 Score = 82.4 bits (90), Expect = 7e-11 Identities = 141/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 131920 ATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTG 131979 ||| | | |||||||||||||||| || ||||| | || | ||| || ||||| Sbjct 9974 ATGGAGGGTTGACTCTTTTTGAATATTATAGTCAGAGAGCGTTCTTCCATCCTCCAGCTG 10033 Query 131980 TTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTT 132039 || || | | | || || || || || || || ||||| |||||||| || ||||| Sbjct 10034 CTTTCCAGCAAATATAAGGCGTTGCTGGTCAGGCGGTATTCCTTCTTTGTCTTGGATTTT 10093 Query 132040 TTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGT 132099 ||| || | | ||| | || || | | || ||||| | ||| | ||||| ||||| Sbjct 10094 TTGCTTTACATTTTCAATGGTGTCTGAAGATTCAACTTCTAGCGTGATTGTTTTCCCAGT 10153 Query 132100 CAGAGTTTTTATGAAAATCTGCATG 132124 || ||||| | ||| || |||||| Sbjct 10154 AAGTGTTTTGACGAAGATTTGCATG 10178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476607553924320