Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mitosporidium_20daphniae_20[genbank_20GCA_5F000760515.1_202014-09- 30] 612 sequences; 5,636,959 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq49 118 9e-22 >seq49 Length=10291 Score = 118 bits (130), Expect = 9e-22 Identities = 169/238 (71%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 || ||||||| | || || |||||| | || || ||| | |||||| | ||||| ||| | Sbjct 10181 CACCATGCAAATCTTCGTCAAAACACTTACTGGGAAAACAATCACGCTAGAAGTTGAATC 10122 Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 || || || || | ||||| |||||||| || ||||| || |||||||| || Sbjct 10121 TTCAGACACCATTGAAAATGTAAAGCAAAAAATCCAAGACAAAGAAGGAATACCGCCTGA 10062 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350 |||||| | || || | | || || || || || |||| |||| || || || Sbjct 10061 CCAGCAACGCCTTATATTTGCTGGAAAGCAGCTGGAGGATGGAAGAACGCTCTCTGACTA 10002 Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAAATGA 25408 |||||||||||||| || ||| | ||| ||||| | ||| || |||||||| | ||| Sbjct 10001 TAATATTCAAAAAGAGTCAACCCTCCATCTAGTGCTGAGACTGCGAGGAGGATATTGA 9944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445090995027840