Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mitosporidium_20daphniae_20[genbank_20GCA_5F000760515.1_202014-09-
30] 612 sequences; 5,636,959 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq49 118 9e-22
>seq49
Length=10291
Score = 118 bits (130), Expect = 9e-22
Identities = 169/238 (71%), Gaps = 0/238 (0%)
Strand=Plus/Minus
Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230
|| ||||||| | || || |||||| | || || ||| | |||||| | ||||| ||| |
Sbjct 10181 CACCATGCAAATCTTCGTCAAAACACTTACTGGGAAAACAATCACGCTAGAAGTTGAATC 10122
Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290
|| || || || | ||||| |||||||| || ||||| || |||||||| ||
Sbjct 10121 TTCAGACACCATTGAAAATGTAAAGCAAAAAATCCAAGACAAAGAAGGAATACCGCCTGA 10062
Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350
|||||| | || || | | || || || || || |||| |||| || || ||
Sbjct 10061 CCAGCAACGCCTTATATTTGCTGGAAAGCAGCTGGAGGATGGAAGAACGCTCTCTGACTA 10002
Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAAATGA 25408
|||||||||||||| || ||| | ||| ||||| | ||| || |||||||| | |||
Sbjct 10001 TAATATTCAAAAAGAGTCAACCCTCCATCTAGTGCTGAGACTGCGAGGAGGATATTGA 9944
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445090995027840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |