Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mitosporidium_20daphniae_20[genbank_20GCA_5F000760515.1_202014-09-
30] 612 sequences; 5,636,959 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq113 210 3e-49
seq602 174 2e-38
>seq113
Length=5777
Score = 210 bits (232), Expect = 3e-49
Identities = 1169/1849 (63%), Gaps = 64/1849 (3%)
Strand=Plus/Plus
Query 68374 GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGA 68433
||||| | ||||| | | ||| || ||||| || ||||| ||||| ||||| || ||
Sbjct 3332 GTAAATTTAATGGCTTCAGCTGCAGGCTTTGTTCGCAGATAATACATGCCGGTCTTTAGC 3391
Query 68434 CCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGA-AT--AACTTGGATCGGCT 68490
|| |||| ||| ||||||||| || || || || || || || |||||
Sbjct 3392 CCCTTTTTCCACGAGTAAAAATGCATAGAAGTGAGCTTCGAGATGGAA---GGCTCGGCA 3448
Query 68491 ATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTT 68550
|| |||||||| | || || ||||| ||||| || || |||| || | ||||| |
Sbjct 3449 ATGTGAATATTGAGAGACTGGCTTTGGTCGATAAAGGCGCCTCGGTCCACGGCCATATCA 3508
Query 68551 ATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGA 68610
|| || |||||||| ||||||||||| | ||| || ||| || | || || || |||
Sbjct 3509 ATGATGCTCTTTTGTGGAATTTCCCACACGGTCCTATAAAGGTGCCTTATGTCTTCAGGA 3568
Query 68611 AGGCTCG----TATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCAT- 68665
| |||| |||| ||| || ||| | | | ||| || || | || |||
Sbjct 3569 AT-CTCGGGTATATTCGCAATTGAGCCA---TTGTTTGCAATGATC--CTGGTTCGCATA 3622
Query 68666 ----CATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGA 68721
||| |||||| | | | ||| | ||| ||||| |||| | ||||||
Sbjct 3623 GACGCATCCCACAAACCTAGATTTATCAAATCCTTAAAGAGATATTGATTGAGAATTTGA 3682
Query 68722 AATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCA 68781
||||| || |||||||||| | || || ||||| || || | || | ||||
Sbjct 3683 AATTCGCCGGATAACACTCGTCTTGTATATATATTTGACGTGTAGGCCTCAAAGCATTCG 3742
Query 68782 TTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTT 68841
|| || | ||||| | || || || || ||||| || || | | || ||
Sbjct 3743 TTGAACCCTAATATTTGGGATGTCGAGGCCGTGGGCATCGGAGCTAGGAGCAAGGAGTTC 3802
Query 68842 CTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCA--AAGATCAGATG 68899
|||| |||| | | || | || | ||||||||| ||||| ||||
Sbjct 3803 CTAACGCCATACTTGGCAACCTTCGCACGAAGGGAATCCCAATCCCATAAAGAT--GATG 3860
Query 68900 GTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGA----TCCATTA 68955
| ||||||||||| | ||| |||| | || || | | | ||| ||| |
Sbjct 3861 GCACAACATTCCACATGTCGAATTGAAAGATGCCCTGAG----AAATGGGGCTTCCCTGG 3916
Query 68956 TATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACA--ACTTGCCTCTAATGCACCGT 69013
|| | || || | || || | ||| || ||||| ||| ||| | ||| | |
Sbjct 3917 TAAGACTCGTATGTACCAGTTTGCTGAGCCAGCTCACACGACTG--CTCAAGAGCAGCAT 3974
Query 69014 AATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGG-A 69072
|| ||||| || || ||||| | || | ||| | ||| | || || || || |
Sbjct 3975 GGTATATTGTCTCAAATATCTTTATGTTCAATTCTCGCGCTGGAGGGCTGTCAAAAGGCA 4034
Query 69073 TAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGT 69132
| || | || || | |||||| | || || || ||||| || || |||||||||
Sbjct 4035 TTTTGCATCGTAAGAAC-GTATCTGCAAGACCTTGGACGCCAATTCCAATCGGTCTATGT 4093
Query 69133 CTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTA 69192
||| ||||||| | ||| || | |||||| | || | ||| ||||| ||||||
Sbjct 4094 CTCATATTTGATCGCCTAGCCTCCTCGACAGGATAGAAGTTGACATCGATAATATTATTA 4153
Query 69193 AGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCCATC- 69251
|||||| ||| ||||| | || | | ||| | ||||||||| || ||
Sbjct 4154 AGATTTTTTGTTACCACTTTGGCAACATAATGTAGCATATCAAAATCAAAAGACCCGTCG 4213
Query 69252 --TATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCAT---TA 69306
| | | |||||| ||||| | || || || |||||||| | ||||||| |
Sbjct 4214 CTTTTGATAAACATCGGAAGTGCAATGGAAGCGAGGTTACAAACGGAAACCTCATCTTTT 4273
Query 69307 GAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTT 69366
|| || || || || || |||||||| | || | |||||| |||||||| |||
Sbjct 4274 GA---TGAGTACTGGATGATTTCTGTACACAAGTTTGAGCTTTTGATGGTCCCCAGGTTT 4330
Query 69367 TGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCA 69426
| |||||| |||| ||| || | || || | || || | || || || |||||
Sbjct 4331 TTTTGATTAGACTTTGCGTTGCAAGAATCTTTAAAGAGCATGTATGGCGTTCCGGTTTCC 4390
Query 69427 ATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGG-TCTTGTAACG 69485
| || | || | ||| | | ||| || | | || | || || | | |||
Sbjct 4391 ACTTGCGCATCAAGAATGGCATACCA---GAGCTT----TTGGGCAGGGATCGTTTTACG 4443
Query 69486 --CTTCTCTTTT----TCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATC 69539
| | ||| |||||| | ||||| | ||| || || ||||||| ||
Sbjct 4444 ACCAAGACCTTTGGCCTCATATGAAGCATATAACTCTTCAAACTCCGGTCCCCAACAGTC 4503
Query 69540 ATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCG 69599
||| || ||| ||||||||||| | | | ||||| |||| | || |||||
Sbjct 4504 GGACAAACCTGGAGCGTCATTTGGACAGAAAAGAGTCCACATCCCATCTTGCTCCACTCG 4563
Query 69600 TTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTC 69659
|||||| || |||||||| ||||| || || ||| ||||| ||| | | || ||
Sbjct 4564 TTTCATGAACAGATCGGGTATCCATAGGGCATAAAAAAGATCCCTGCACCGACCCTCGTC 4623
Query 69660 ATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAG 69719
||||| |||||| || | ||| | || || | || ||||| ||||| || || |
Sbjct 4624 TTTTCCAAAATTTTTCTTTAAATCCAAGAAATCGAAAACATCAGCGTGCCAGGGCTCCAA 4683
Query 69720 ATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTT 69779
||| || || | | | || ||||||||||| || || ||||| | |||| ||||| |
Sbjct 4684 ATAAATTGCAAAGGCGCCAGGTCGTTTATTCCCGCCTTGATCGACATATCGTGCAGTCAT 4743
Query 69780 ATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATA 69839
|||||||| | ||||| || | ||||| || || | ||| |||||||| ||||||
Sbjct 4744 GTTATAGACACGAAGCATGGGGACTATACCGTTTGAGTAGCCACCTGTTCCAGCAATATA 4803
Query 69840 ACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGAT 69899
| || || | |||||| ||| ||||| | || || || || ||
Sbjct 4804 AGACCCAGAGGCTCTTATATTATGGATATGAAGACCAACACCCCCGGCAGACTTGCTAAT 4863
Query 69900 TAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAG 69959
| ||||| ||||| ||||||||||| || || ||| || |||| ||
Sbjct 4864 CAATGCACATGTTTTCAGGGTGTCATATATTCCGGTGATCGAATCGTCAGTCATTGCAAT 4923
Query 69960 AAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGC 70019
| ||||||| || | || | | || || |||||||| | || || || ||
Sbjct 4924 CAAAAAACAGGATGAAAGCTGGGGCCGCGGTGTACCGGCATTAAAAAGGGTTGGGGAGGC 4983
Query 70020 GTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATC-CC 70078
|| |||||| | ||| | || ||| || ||||| || || || || | || |
Sbjct 4984 ATGGGTGAACATCCGCTGAGACATCAAATTATACGTTTCGATGGCAGAGTCGACGTCTTC 5043
Query 70079 ACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTAT 70138
|| | ||||| || | ||| || | ||| | || || ||| || || || || ||
Sbjct 5044 ACCG-TGAATGCCAAGCGCAACTCTCATGATCAGATACTGGGGACGCTCCACAACCTTGC 5102
Query 70139 TATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATA 70187
| ||| ||| ||| || || || || |||||||| ||||||||
Sbjct 5103 CCCTGATTCTCAGCAGATACGAACGCTCAAGGGTTTTAAATCCAAAATA 5151
>seq602
Length=19998
Score = 174 bits (192), Expect = 2e-38
Identities = 385/575 (67%), Gaps = 7/575 (1%)
Strand=Plus/Plus
Query 39631 ATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACC 39690
|||||| ||||| |||||||| || | ||||| ||||| || || |||||||| |||||
Sbjct 6851 ATGTAGACCCTCGTCTCTACTGATCAGCTCGTTGGAAAAAGTAAGCCCAGGCATCAGACC 6910
Query 39691 ACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGC 39750
|||||||| | |||||| ||||| ||||| || || |||||||| ||||| || |||||
Sbjct 6911 GCGCTTTTTTATCCAAAAGATGGCTGCAAACGACCCGGAAAAGAATATGCCCTCAACTGC 6970
Query 39751 TGCAAATGCAACAAGTCTCTCTCCGTAA--CTTGTATC---ATTATGTATCCACTTCTGT 39805
||||||||||| || ||||| || || | ||| ||| ||||| |||
Sbjct 6971 GGCAAATGCAACCAG--TCTCTGCGAAAAGGGGGCATCTGGATTTGCAATCCAGTTCAAA 7028
Query 39806 GCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAATGT 39865
||||| | ||||| || | | | ||| || ||| || || || || | | |
Sbjct 7029 GCCCATTTGGCTTTTTTTTCAATGCTAGGGATATATTCGATGGCGTTGAACAATTTTAGA 7088
Query 39866 TTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGATG 39925
|| | ||| || |||||| || || | || |||||| || ||||||||
Sbjct 7089 CGCTCCTGCTCATCGCGAATATATGTGTCAATCAGAAGGGAATACATCTCAGAATGGATA 7148
Query 39926 TTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTGAA 39985
||||| ||| || || || |||||||| | | || || | ||||| ||||| |
Sbjct 7149 TTTTCCATCATGATTTGGAACCCGTAAAAGAAACGAGCCTCTGGGATTTGCACCTCCCTA 7208
Query 39986 CAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAAT 40045
||| | | | ||||||||||| || |||||||| || |||||||| |||||
Sbjct 7209 GCAAAGCGAACAACTAAATTTTCATTTACAATTCCATCGGAGGCTGCAAAAAAGGCCAAA 7268
Query 40046 ACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCTTTT 40105
|| || ||||||| ||| || ||| ||| | | | ||| |||
Sbjct 7269 ACGTGAGAGATAAAATGGCGTTCCCCGTCATTCAGAGACGCCCAATGGGTTAGATCCTTT 7328
Query 40106 GATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCCAT 40165
|| | || || ||||| | ||||| || || || | | |||||| || | |||
Sbjct 7329 GACAGGTCCACCTCTTCGACCGTCCAGAAGGAAGCAACCGACTTTTTATAAAAAAGCCAG 7388
Query 40166 ATATCACGATATTGTATTGGAAAAATAACAAATCT 40200
|| || ||||| ||||||||||| || |||||
Sbjct 7389 ATTTCCTCATATTTGATTGGAAAAATCACGAATCT 7423
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686903545147680
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