Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mitosporidium_20daphniae_20[genbank_20GCA_5F000760515.1_202014-09-
30] 612 sequences; 5,636,959 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq113 127 2e-24
>seq113
Length=5777
Score = 127 bits (140), Expect = 2e-24
Identities = 146/195 (75%), Gaps = 1/195 (1%)
Strand=Plus/Minus
Query 20621 AAGG-ACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGC 20679
|||| || |||| |||||||| |||||||| ||||| ||||||||||| || ||||| |
Sbjct 3556 AAGGCACCTTTATAGGACCGTGTGGGAAATTCCACAAAAGAGCATCATTGATATGGCCGT 3497
Query 20680 CGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAG 20739
|| || ||||||| |||||||| |||||| |||||| | ||| | | ||
Sbjct 3496 GGACCGAGGCGCCTTTATCGACCAAAGCCAGTCTCTCAATATTCACATTGCCGAGCCTTC 3437
Query 20740 CCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCAT 20799
| | ||||||| | || |||||| | ||| ||| | |||||||| ||||| |||||
Sbjct 3436 CATCTCGAAGCTCACTTCTATGCATTTTTACTCGTGGAAAAAGGGGCTAAAGACCGGCAT 3377
Query 20800 GTACTATCTGCGGAC 20814
||| |||||||| ||
Sbjct 3376 GTATTATCTGCGAAC 3362
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548520603785280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |