Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mitosporidium_20daphniae_20[genbank_20GCA_5F000760515.1_202014-09- 30] 612 sequences; 5,636,959 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq113 127 2e-24 >seq113 Length=5777 Score = 127 bits (140), Expect = 2e-24 Identities = 146/195 (75%), Gaps = 1/195 (1%) Strand=Plus/Minus Query 20621 AAGG-ACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGC 20679 |||| || |||| |||||||| |||||||| ||||| ||||||||||| || ||||| | Sbjct 3556 AAGGCACCTTTATAGGACCGTGTGGGAAATTCCACAAAAGAGCATCATTGATATGGCCGT 3497 Query 20680 CGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAG 20739 || || ||||||| |||||||| |||||| |||||| | ||| | | || Sbjct 3496 GGACCGAGGCGCCTTTATCGACCAAAGCCAGTCTCTCAATATTCACATTGCCGAGCCTTC 3437 Query 20740 CCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCAT 20799 | | ||||||| | || |||||| | ||| ||| | |||||||| ||||| ||||| Sbjct 3436 CATCTCGAAGCTCACTTCTATGCATTTTTACTCGTGGAAAAAGGGGCTAAAGACCGGCAT 3377 Query 20800 GTACTATCTGCGGAC 20814 ||| |||||||| || Sbjct 3376 GTATTATCTGCGAAC 3362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548520603785280