Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mitosporidium_20daphniae_20[genbank_20GCA_5F000760515.1_202014-09- 30] 612 sequences; 5,636,959 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq602 215 4e-51 >seq602 Length=19998 Score = 215 bits (238), Expect = 4e-51 Identities = 415/604 (69%), Gaps = 20/604 (3%) Strand=Plus/Plus Query 4542 AATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAAC 4601 |||| ||| ||||| || ||| | ||| |||||||| || ||||| ||||| ||||| Sbjct 6831 AATAGACAAGCAAACTCGGTATGTAGACCCTCGTCTCTACTGATCAGCTCGTTGGAAAAA 6890 Query 4602 GTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAA 4661 || | || ||||| | ||| | |||||| | |||||| || || ||||| ||||| ||| Sbjct 6891 GTAAGCCCAGGCATCAGACCGCGCTTTTTTATCCAAAAGATGGCTGCAAACGACCCGGAA 6950 Query 4662 AAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGC-TTT 4720 ||||||||||| || || |||||||| || || | || |||| || ||| | | Sbjct 6951 AAGAATATGCCCTCAACTGCGGCAAATGCAACCAGTC--TCTGCGAA-AAGGGGGCATCT 7007 Query 4721 GTCTTT--AATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTAT 4778 | ||| |||||| || || ||||| || |||||||| | || || || || | Sbjct 7008 GGATTTGCAATCCAGTTCAAAGCCCATTTGGCTTTTTTTTCAATGCTAGGGATATATTCG 7067 Query 4779 ATAGCGTTAAATAATTT---AC-TTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAG 4834 || ||||| || ||||| || | | | | || ||||||| ||||| || || Sbjct 7068 ATGGCGTTGAACAATTTTAGACGCTCCTGCTCA----TCGCGAATATATGTGTCAATCAG 7123 Query 4835 TAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCT 4894 ||| |||||| |||||||| |||||||| || || || || ||||||||| | | Sbjct 7124 AAGGGAATACATCTCAGAATGGATATTTTCCATCATGATTTGGAACCCGTAAAAGAAACG 7183 Query 4895 AGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACC 4954 ||| |||| | ||| || || || ||| | | ||||| ||||| ||||| || || Sbjct 7184 AGCCTCTGGGATTTGCACCTCCCTAGCAAAGCGAACAACTAAATTTTCATTTACAATTCC 7243 Query 4955 GTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTT---CGTCAGGCTT 5011 || |||||||||||| |||||||| ||||| ||||| | ||| ||||| || Sbjct 7244 ATCGGAGGCTGCAAAAAAGGCCAAAACGTGAGAGATAAAATGGCGTTCCCCGTCA---TT 7300 Query 5012 AAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGA 5071 || ||| |||| | ||| || | | || || ||||| || ||||| || || Sbjct 7301 CAGAGACGCCCAATGGGTTAGATCCTTTGACAGGTCCACCTCTTCGACCGTCCAGAAGGA 7360 Query 5072 CGCTTCCGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAA 5131 || ||| ||||| || | | ||| || || ||| | || |||| || || || Sbjct 7361 AGCAACCGACTTTTTATAAAAAAGCCAGATTTCCTCATATTTGATTGGAAAAATCACGAA 7420 Query 5132 TCTG 5135 |||| Sbjct 7421 TCTG 7424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427046414743796