Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mitosporidium_20daphniae_20[genbank_20GCA_5F000760515.1_202014-09- 30] 612 sequences; 5,636,959 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq602 116 4e-21 >seq602 Length=19998 Score = 116 bits (128), Expect = 4e-21 Identities = 310/469 (66%), Gaps = 16/469 (3%) Strand=Plus/Plus Query 23503 AATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAAT 23562 |||| ||| ||||| || |||||| || || || ||||| |||| || || ||||| Sbjct 6831 AATAGACAAGCAAACTCGGTATGTAGACCCTCGTCTCTACTGATCAGCTCGTTGGAAAAA 6890 Query 23563 GTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAA 23622 || | || ||||| | || || ||||| |||||||| || || ||||| || |||||| Sbjct 6891 GTAAGCCCAGGCATCAGACCGCGCTTTTTTATCCAAAAGATGGCTGCAAACGACCCGGAA 6950 Query 23623 AAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTAC-CAAATGTTGCATTATA 23681 ||||| || |||||||| || ||||| || || || | | | | ||| | |||| Sbjct 6951 AAGAATATGCCCTCAACTGCGGCAAATGCAACCAGTC-TCTGCGAAAAGGGGGCATCTGG 7009 Query 23682 ATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACT--CAATTGTTTCA 23739 || | |||||| || | ||| || || || |||| | || || ||| Sbjct 7010 ATTTGCAATCCAGTTCAAAGCCCATTTGGCTTT--TTTTTCAATGCTAGGGATATATTCG 7067 Query 23740 ATTGCTTTTAAGAGAAAAGTTTT-----TTCTTCATTATCTGTTATATATGTATCAATTA 23794 || || || ||| | |||| || | | ||| |||||||| ||||| | Sbjct 7068 ATGGCGTT-----GAACAATTTTAGACGCTCCTGCTCATCGCGAATATATGTGTCAATCA 7122 Query 23795 GTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATC 23854 | | |||||| |||||||| |||||||| || || || ||||| ||||| | | Sbjct 7123 GAAGGGAATACATCTCAGAATGGATATTTTCCATCATGATTTGGAACCCGTAAAAGAAAC 7182 Query 23855 TAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATAC 23914 ||| || | | ||| || || || ||| | | |||||||||| || ||||| | Sbjct 7183 GAGCCTCTGGGATTTGCACCTCCCTAGCAAAGCGAACAACTAAATTTTCATTTACAATTC 7242 Query 23915 CATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTC 23963 |||| || ||||| || || | ||| | |||||||| | ||| Sbjct 7243 CATCGGAGGCTGCAAAAAAGGCCAAAACGTGAGAGATAAAATGGCGTTC 7291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521484010616800