Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mitosporidium_20daphniae_20[genbank_20GCA_5F000760515.1_202014-09- 30] 612 sequences; 5,636,959 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq33 116 3e-21 seq49 105 5e-18 >seq33 Length=72831 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || ||||| || |||||| ||||| ||||| |||| ||| || | || || Sbjct 32083 ACAAGATGAAGAGTAGACTCCTTCTGGATATTGTAGTCGGAAAGTGTACGTCCATCCTCA 32024 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| |||||||| |||| ||||||||||| | || | || ||||| || Sbjct 32023 AGCTGCTTTCCGGCAAAAATCAGGCGCTGCTGATCGGGGGGGATTCCCTCCTTATCTTGA 31964 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | |||||||| |||||| ||||| | || || |||||| Sbjct 31963 ATCTTGGCCTTGACATTCTCAATGGTGTCACTGGATTCTACCTCGAGAGTGATGGTCTTT 31904 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || |||||||| || ||||||||||| Sbjct 31903 CCTGTAAGGGTCTTAACAAAGATTTGCAT 31875 >seq49 Length=10291 Score = 105 bits (116), Expect = 5e-18 Identities = 169/242 (70%), Gaps = 2/242 (1%) Strand=Plus/Plus Query 44110 TCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC 44169 ||| |||| |||||||| ||| || || || || ||| ||||| || || || || | Sbjct 9950 TCCTCCTCGCAGTCTCAGCACTAGATGGAGGGTTGACTCTTTTTGAATATTATAGTCAGA 10009 Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 ||| | | || ||||||||||| || ||||| || | || ||||| || | || Sbjct 10010 GAGCGTTCTTCCATCCTCCAGCTGCTTTCCAGCAAATATAAGGCGTTGCTGGTCAGGCGG 10069 Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCAC 44289 | ||||| || || || || ||||| | || | |||||||| | ||||| || Sbjct 10070 TATTCCTTCTTTGTCTTGGATTTTTTGCTTTACATTTTCAATGGTGTCTGAAGATTCAAC 10129 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATGTGAATGAA 44349 || | ||| || || || || || || || || ||||||||||||||| |||| |||| Sbjct 10130 TTCTAGCGTGATTGTTTTCCCAGTAAGTGTTTTGACGAAGATTTGCATG--GTGAGTGAA 10187 Query 44350 AA 44351 || Sbjct 10188 AA 10189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359987714921604