Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mitosporidium_20daphniae_20[genbank_20GCA_5F000760515.1_202014-09-
30] 612 sequences; 5,636,959 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq49 176 1e-38
>seq49
Length=10291
Score = 176 bits (194), Expect = 1e-38
Identities = 168/215 (78%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| ||||| || || || ||||| ||||| || || || ||| ||||||
Sbjct 10174 CAAATCTTCGTCAAAACACTTACTGGGAAAACAATCACGCTAGAAGTTGAATCTTCAGAC 10115
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || || || ||||| || || |||||||||||||| || || |||||||||
Sbjct 10114 ACCATTGAAAATGTAAAGCAAAAAATCCAAGACAAAGAAGGAATACCGCCTGACCAGCAA 10055
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| ||||| || || ||||| ||||| || |||||||| || || | || ||||| |
Sbjct 10054 CGCCTTATATTTGCTGGAAAGCAGCTGGAGGATGGAAGAACGCTCTCTGACTATAATATT 9995
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
|||||||| ||||| || ||||| || |||||||
Sbjct 9994 CAAAAAGAGTCAACCCTCCATCTAGTGCTGAGACT 9960
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203721761242728
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |