Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematocida_20displodere_20[genbank_20GCA_5F001642395.1_202016-05-11] 42 sequences; 3,066,400 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 1e-14 >seq1 Length=651558 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 20958 AGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGG 21017 ||||||||||| | || | ||| ||||| |||||||| || || || || ||| Sbjct 630368 AGCCTGAGCACAAGGTGGATGGTGCTTTCCTTCTGAATGTTGTAATCTGCAAGAGTTCTT 630427 Query 21018 GCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCC 21077 ||||||| ||||| || || ||| ||||||| ||||||||||| || | |||||| Sbjct 630428 CCGTCCTCAAGCTGCTTCCCGGCAAAAATAAGCCTCTGCTGGTCGGGAGGGATGCCTTCT 630487 Query 21078 TTGTCGGCGATCTTTTGT-TTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGT 21136 ||||| ||| ||| || ||||| | | || || || |||| || | ||| Sbjct 630488 TTGTCCTGGAT-TTTGGTCTTCACAGTGTCAACCGTGTCTGAATTCTCCACGTCTAAGGT 630546 Query 21137 AATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||||||||||| || | || || || || || ||||| Sbjct 630547 AATGGTCTTGCCTGTGAGTGTCTTTACGAAGATCTGCAT 630585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422258983856072