Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nematocida_20displodere_20[genbank_20GCA_5F001642395.1_202016-05-11]
42 sequences; 3,066,400 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq4 196 7e-45
seq34 113 7e-20
>seq4
Length=66353
Score = 196 bits (216), Expect = 7e-45
Identities = 590/895 (66%), Gaps = 36/895 (4%)
Strand=Plus/Plus
Query 124985 TAGATTTACCCTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCA 125044
||||||| | | ||||| | ||| | ||||| ||| | ||||||||||| ||
Sbjct 58953 TAGATTTGTCATCTTTCCAGTGCAGTACTACGACATCTGGAACATGTACAAAAACGCAGT 59012
Query 125045 GGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAG-GACCTGTACGATTGGGAGA 125103
||| || ||||| | ||||| ||||| || | ||| ||| || || |||||||
Sbjct 59013 GGCTAGTTTCTGGACCGCAGAAGAAGTCGACCT-TGGAAGAGACATGGCTGACTGGGAGA 59071
Query 125104 CTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCT 125163
| || || ||| || || | || || || || | | ||||||||||||| ||
Sbjct 59072 AGC--TTAACGCCAAC-GAAAGACACTTCATTTCCTACGTCCTCGCCTTCTTTGCCGCCT 59128
Query 125164 CCGATGGAATCGTCAACGACAATCTG-TTGACACGATTCTCTCAAGAGTTGACCATTCCA 125222
| || ||||| || || || || ||| |||| | | || ||| ||| || || ||
Sbjct 59129 CTGACGGAATTGTTAATGAAAACCTGGTTGAAAGGTTTGCCTCT-GAGGTGCAAAT--CA 59185
Query 125223 GAGGTG-TCG-TGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGT 125280
| | | ||| ||||| ||||| ||||| || |||||||||||| | ||| | || ||||
Sbjct 59186 GTGAAGCTCGATGCTTCTACGGCTTCCAGATTATGATTGAGAACATCCACGCTGAGATGT 59245
Query 125281 ACTCTACACTGATTGACATGTACATTCGCGATCCGCAACGTAAACACATGCTC-TTTAAC 125339
|||| ||| ||||||| |||||| | || || | || ||| || | || |||||
Sbjct 59246 ACTCCCTACTCATTGACACGTACAT-CAAGAGCCAGAGCGAAAAGACTTTCTTGTTTAAT 59304
Query 125340 GCAATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGAT 125399
|| || || | | ||| ||| || ||||| | |||| | | ||||||||
Sbjct 59305 GCCATTGAGAACATCCCGGTCATAAAAAAGAAGGCAGACTGGGCGCTGCGGTGGATATCA 59364
Query 125400 GACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTC 125459
|| | ||| | | || || | || ||||| || ||| || || |||||||||
Sbjct 59365 GATGCTAAGGCCAGCTTTGCAGAGCGGCTAGTGGCCTTTGCCTGTGTTGAAGGCATCTTC 59424
Query 125460 TTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTG 125519
|| || || ||||| || ||||| ||||||||||| || ||||| ||||| || ||
Sbjct 59425 TTCTCCGGGTCATTTGCAGCTATCTTCTGGCTCAAGAAACGAGGACTTATGCCTGGGCTA 59484
Query 125520 ACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTA 125579
|| | ||||||| |||| |||||||| ||||| || || |||||||| |||
Sbjct 59485 ACCTTCTCTAACGAGCTTATCAGCCGAGACGAAGGCCTTCATTGCGACTTTGCTTGCCTA 59544
Query 125580 CT-GTTTCGCAACTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACAT 125638
|| ||||| ||| | ||| ||||| ||| ||| || ||
Sbjct 59545 CTACACTCGCACCTA----AACAACAAGT---------GCGATAAAA---TCAAGAAAAT 59588
Query 125639 TGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCAT 125698
|| || ||||| || || ||||||| || ||| | || || ||| |
Sbjct 59589 CGTTGAAGAGGCCGTTGTAATTGAGAAAGAGTTCTTATGCGAGGCTCTCCCCGTCTCTCT 59648
Query 125699 GATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACT 125758
|||||||| || | | |||||| ||||||| |||||||| || || || || ||
Sbjct 59649 CATTGGCATCAATGTCGATACTATGTGCCAGTACATTGAGTTTGTTGCTGACCGGCTTCT 59708
Query 125759 GTACGAGTTGATTGGC---CGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGAC 125815
| | | ||||| | ||||| ||||||||| |||| || || || || |||
Sbjct 59709 TCTC---TCGCTTGGCGAGCCAAAGATATACAACGCCCAGAACCCATTCGACTTTATGGA 59765
Query 125816 CAGCATATCACTAGAGGGTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC 125870
||| || || || ||| ||||||| |||||||||| |||| ||||||
Sbjct 59766 GTACATCTCGCTGCGAGGAAAGTCCAACTTCTTCGAGAAGAGGGTCTCTGAGTAC 59820
>seq34
Length=240578
Score = 113 bits (124), Expect = 7e-20
Identities = 321/487 (66%), Gaps = 10/487 (2%)
Strand=Plus/Minus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||| ||||| || ||||||||| | || | |||||| |||| || |||||| | ||
Sbjct 163637 CAGGGGGGCAACAAGCGGCCAGGCTCCATTGTGGTCTACCTGGAGCCGTGGCACCCCGAT 163578
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
|| |||||||| | ||| || | |||||| | ||| || ||| ||||| ||
Sbjct 163577 GTCTTTGACTTCCTGGAGCTGAGGAAAAACACGGGCAAAGACGAGCTCAGAGCCCGGAGT 163518
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACG--GTGGCT 97053
||||| || || ||| | || |||||||||||| |||| || | |||| |||
Sbjct 163517 TTGTTCCTGGCGCTGTGGATACCCGATTTGTTCATGCAGCGGGTGGAGGACGACTTGG-- 163460
Query 97054 ACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGA--TTGCTGGGGCGAAGA 97111
| |||| || | || || ||| | | || || ||| || |||| || ||
Sbjct 163459 AGTGGACGCTTTTCTGTCCGGACCAGGCCAAGGGCCTTCACGAGGTTTATGGG--GACGA 163402
Query 97112 GTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCGATGC 97171
||||| ||| ||| | ||||||| |||||| | | | | | || ||
Sbjct 163401 GTTTGTGGCTTTGTATGAGAGGTACGAGCGAGAGGGTCTGGGCCGGCGGAGTGTTTCGGC 163342
Query 97172 ACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCT 97231
|| | || |||||| ||| || |||| || | ||||| || || ||||| ||
Sbjct 163341 GCGGAAGCTTTGGAAGTTCATTCTGGAGGCTGAGATTGAGACGGGCGTGCCCTACATCCT 163282
Query 97232 CTACAAGGATACCGTGAATCGCAACAGCAACCA-ACGCCACTTGGGCACCATCAAGGGCT 97290
||||||||| | | || || || |||||||| | | |||||| || ||||||||
Sbjct 163281 CTACAAGGACAGCTGCAACCGGAAGAGCAACCAGAAGAACCTTGGG-ACTATCAAGGGAA 163223
Query 97291 CCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTC 97350
|||||| || | || || || |||| || || || |||| |||||||| ||
Sbjct 163222 GCAATCTTTGTGCAGAGATAGTTGAGTTTACCAGCCCAGAGGAGATAGCAGTTTGTAATC 163163
Query 97351 TGGCATC 97357
|||| ||
Sbjct 163162 TGGCGTC 163156
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741058810943920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |