Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematocida_20displodere_20[genbank_20GCA_5F001642395.1_202016-05-11] 42 sequences; 3,066,400 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq34 98.7 9e-16 seq1 96.9 3e-15 >seq34 Length=240578 Score = 98.7 bits (108), Expect = 9e-16 Identities = 123/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 145625 GCGATCGACGCCAAATTACAAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCG 145684 || || ||||||| |||||||||||| ||||||| | | | | | | || ||||| Sbjct 163150 GCCATGGACGCCAGATTACAAACTGCTATCTCCTCTGGGCTGGTAAACTCAACTATCTCT 163209 Query 145685 GCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCAC 145744 || || | |||||| | ||||| || || || || | ||| || || |||| |||||| Sbjct 163210 GCACAAAGATTGCTTCCCTTGATAGTCCCAAGGTTCTTCTGGTTGCTCTTCCGGTTGCAG 163269 Query 145745 GCGTCCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCA 145793 |||||||||||| ||||| || |||| ||||| | || | ||||| Sbjct 163270 CTGTCCTTGTAGAGGATGTAGGGCACGCCCGTCTCAATCTCAGCCTCCA 163318 >seq1 Length=651558 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082 ||||| | || ||||| ||||| |||||||||||||| | || | |||| Sbjct 630374 AGCACAAGGTGGATGGTGCTTTCCTTCTGAATGTTGTAATCTGCAAGAGTTCTTCCGTCC 630433 Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142 || |||||||| || || | || | | ||||||||| |||||||| ||||||||||| Sbjct 630434 TCAAGCTGCTTCCCGGCAAAAATAAGCCTCTGCTGGTCGGGAGGGATGCCTTCTTTGTCC 630493 Query 131143 GTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTT 131202 |||||| ||| | || || || || | ||| | ||| | ||||| ||| Sbjct 630494 TGGATTTTGGTCTTCACAGTGTCAACCGTGTCTGAATTCTCCACGTCTAAGGTAATGGTC 630553 Query 131203 TTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || || || || || |||||||| ||||||||| Sbjct 630554 TTGCCTGTGAGTGTCTTTACGAAGATCTGCATG 630586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012552193280