Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematocida_20displodere_20[genbank_20GCA_5F001642395.1_202016-05-11] 42 sequences; 3,066,400 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 3e-13 >seq1 Length=651558 Score = 91.5 bits (100), Expect = 3e-13 Identities = 142/201 (71%), Gaps = 4/201 (2%) Strand=Plus/Plus Query 218650 GAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACCATCACGGT 218709 || |||||||| || ||| | |||| |||||| | || || | |||||| ||||| Sbjct 386694 GAGATTAAGGTGGCCCAGCTAGCTGGGTATGTAGCTGAGCACTCAGCCTACCACCACGGG 386753 Query 218710 GAGCAGAGTC--TGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGTGGGCAGTAACA 218767 |||||||||| |||| | ||||||| | |||| ||||||| ||| || |||| Sbjct 386754 GAGCAGAGTCTTTGCATG--ACCATTGTCAACCTGGCCCAGGACTTTGTTGGGTCAAACA 386811 Query 218768 ACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATTGGGTGGAAAGGATA 218827 || || |||| | |||| || |||||||| | ||||| ||| ||||||||| Sbjct 386812 ACCTGCCGCTGCTCCAGCCCATTGGGCAGTTTGGAACGCGTCTTCAGGGCGGAAAGGATG 386871 Query 218828 GTGCTTCTGCCAGGTATATCT 218848 || ||||||||| |||| Sbjct 386872 CAGCGAGTGCCAGGTACATCT 386892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836246895322