Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematocida_20displodere_20[genbank_20GCA_5F001642395.1_202016-05-11] 42 sequences; 3,066,400 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 2e-12 seq12 86.0 5e-12 >seq1 Length=651558 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/198 (71%), Gaps = 6/198 (3%) Strand=Plus/Plus Query 114191 TTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTA 114250 ||| || |||||||||||||| | ||| | || ||||| || || || || | Sbjct 630394 TTCCTTCTGAATGTTGTAATCTGCAAGAGTTCTTCCGTCCTCAAGCTGCTTCCCGGCAAA 630453 Query 114251 GATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTG 114310 || || | ||| ||||| ||||| |||||||||||||| || ||| || || | | Sbjct 630454 AATAAGCCTCTGCTGGTCGGGAGGGATGCCTTCTTTGTCCTGGAT-TTTGGTCTTCACAG 630512 Query 114311 T-TCAACGGTGTCGGTGGAT--TCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTT 114367 | ||||| ||||| || || || ||||| | ||| | || ||||| || || || || Sbjct 630513 TGTCAACCGTGTC--TGAATTCTCCACGTCTAAGGTAATGGTCTTGCCTGTGAGTGTCTT 630570 Query 114368 TACAAAAATCTGCATGGC 114385 ||| || ||||||||||| Sbjct 630571 TACGAAGATCTGCATGGC 630588 >seq12 Length=514210 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || || || || || | || | ||| ||||| ||| || ||||||||||| || Sbjct 293333 CCTCCCCGGAGCCTGAGCACCAGATGAATCGTGCTTTCCTTCTGAATGTTGTAGTCTGAA 293274 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | || | ||| ||||| || || || ||| |||| || | || ||||| | ||| Sbjct 293273 AGTGTCCTTCCATCCTCAAGCTGCTTTCCGGCGAAGATAAGTCTTTGCTGGTCAGAAGGT 293214 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || || || ||||| ||||||| |||| | || | ||||| ||| || |||| Sbjct 293213 ATTCCCTCCTTGTCCTGAATCTTTGCCTTTACGTTCTCTATTGTGTCAGTGCTTTGGACG 293154 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | ||| | ||| ||||| || || || ||||| || |||||||| Sbjct 293153 TCAATGGTGATCGTCTTGCCTGTAAGCGTCTTTACGAATATCTGCAT 293107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420134184943704