Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematocida_20displodere_20[genbank_20GCA_5F001642395.1_202016-05-11] 42 sequences; 3,066,400 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 2e-11 >seq1 Length=651558 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138424 TCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAG 138483 ||||| ||||||||||| || | ||| | |||||| || || || |||| | | Sbjct 630395 TCCTTCTGAATGTTGTAATCTGCAAGAGTTCTTCCGTCCTCAAGCTGCTTCCCGGCAAAA 630454 Query 138484 ATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGT 138543 || || | ||| ||||| ||||| || ||||||||||| || |||| || || | || Sbjct 630455 ATAAGCCTCTGCTGGTCGGGAGGGATGCCTTCTTTGTC-CTGGATTTTGGTCTTCACAGT 630513 Query 138544 -TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || || ||||| | |||||| || | || | || || || || || || ||||| Sbjct 630514 GTCAACCGTGTCTGAATTCTCCACGTCTAAGGTAATGGTCTTGCCTGTGAGTGTCTTTAC 630573 Query 138603 AAAAATCTGCATGGC 138617 || ||||||||||| Sbjct 630574 GAAGATCTGCATGGC 630588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262139462240