Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematocida_20displodere_20[genbank_20GCA_5F001642395.1_202016-05-11] 42 sequences; 3,066,400 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq12 109 1e-18 seq2 105 2e-17 >seq12 Length=514210 Score = 109 bits (120), Expect = 1e-18 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 ||||| || | ||||||||| | | ||||||||||| || |||||||||||||||||| Sbjct 293297 TCCTTCTGAATGTTGTAGTCTGAAAGTGTCCTTCCATCCTCAAGCTGCTTTCCGGCGAAG 293238 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGAT 199558 || || | |||||||| | | ||||| || |||||||||||| ||| ||| Sbjct 293237 ATAAGTCTTTGCTGGTCAGAAGGTATTCCCTCCTTGTCCTGAATCTTTGCCTTTACGTTC 293178 Query 199559 TCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACA 199618 || | ||||| || ||| || || | ||||||||||| || || || || || || Sbjct 293177 TCTATTGTGTCAGTGCTTTGGACGTCAATGGTGATCGTCTTGCCTGTAAGCGTCTTTACG 293118 Query 199619 AAAATTTG 199626 || || || Sbjct 293117 AATATCTG 293110 >seq2 Length=77616 Score = 105 bits (116), Expect = 2e-17 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 ||||| || | ||||||||| | | ||||||||||| || |||||||||||||||||| Sbjct 15598 TCCTTCTGAATGTTGTAGTCTGAAAGTGTCCTTCCATCCTCAAGCTGCTTTCCGGCGAAG 15539 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGAT 199558 || || | |||||||| | | ||||| || |||||||||||| ||| ||| Sbjct 15538 ATAAGTCTTTGCTGGTCAGAAGGTATTCCCTCCTTGTCCTGAATCTTTGCCTTTACGTTC 15479 Query 199559 TCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACA 199618 || | ||||| || ||| || || | ||||| ||||| || || || || || || Sbjct 15478 TCTATTGTGTCAGTGCTTTGGACGTCAATGGTGATTGTCTTGCCTGTAAGCGTCTTTACG 15419 Query 199619 AAAATTTG 199626 || || || Sbjct 15418 AATATCTG 15411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178920965592814