Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematocida_20displodere_20[genbank_20GCA_5F001642395.1_202016-05-11] 42 sequences; 3,066,400 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 2e-13 >seq1 Length=651558 Score = 91.5 bits (100), Expect = 2e-13 Identities = 167/243 (69%), Gaps = 4/243 (2%) Strand=Plus/Plus Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425 |||||| || | | | ||| || || | || || ||||| || || ||||| || | Sbjct 630358 GCCTCCCCTGAGCCTGAGCACAAGGTGGATGGTGCTTTCCTTCTGAATGTTGTAATCTGC 630417 Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485 ||||| | |||| || |||||||| ||||| || || | | ||||||||||| || Sbjct 630418 AAGAGTTCTTCCGTCCTCAAGCTGCTTCCCGGCAAAAATAAGCCTCTGCTGGTCGGGAGG 630477 Query 46486 CACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGAT--TCC 46543 | || || |||||| ||| || |||| | || | ||||||| || || ||| Sbjct 630478 GATGCCTTCTTTGTCCTGGATTTTGGTCTTCACAGTGTCAACCGTGT--CTGAATTCTCC 630535 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGCACAAA 46603 || || | || ||||| ||||| || || || || || ||||| ||||| ||||| Sbjct 630536 ACGTCTAAGGTAATGGTCTTGCCTGTGAGTGTCTTTACGAAGATCTGCATGGCAAACAAA 630595 Query 46604 CAA 46606 ||| Sbjct 630596 CAA 630598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565238103249840