Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematocida_20displodere_20[genbank_20GCA_5F001642395.1_202016-05-11] 42 sequences; 3,066,400 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq4 138 1e-27 >seq4 Length=66353 Score = 138 bits (152), Expect = 1e-27 Identities = 525/806 (65%), Gaps = 30/806 (4%) Strand=Plus/Plus Query 101817 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTCTAAATGAA 101876 ||||| || ||||| || || || || || ||| || ||| ||| || || | Sbjct 59023 TGGACCGCAGAAGAAGTCGACCTTGGAAGAGACATGGCTGACTGGGAGAAGCTTAACGCC 59082 Query 101877 AATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAATTGTT 101936 || |||| | ||||| ||| |||| || |||||||| | || || ||||||||| Sbjct 59083 AACGAAAGACACTTCATTTCCTACGTCCTCGCCTTCTTTGCCGCCTCTGACGGAATTGTT 59142 Query 101937 TTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCAATCCTCTGAAGCGAGATCTTTC 101996 ||| || | | | | ||||| |||||||||| | |||||| ||| ||| Sbjct 59143 AATGAAAACCTGGTTGAAAGGTTTGCCTCTGAGGTGCAAATCAGTGAAGCTCGATGCTTC 59202 Query 101997 TATGCGTATCAATGTCATAAT-GAAATGGTGCATGGGGAGACATACAGTAAACTCATAGA 102055 || | | || | | || || || | | || | |||| ||| |||||| || Sbjct 59203 TACGGCT-TCCAGATTATGATTGAGAACATCCACGCTGAGATGTACTCCCTACTCATTGA 59261 Query 102056 CAAGTATATTAAG-GATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCA-AACAGTT 102113 || ||| || ||| | | || || |||| | ||| | ||||| | |||| | Sbjct 59262 CACGTACATCAAGAGCCAGAGC-GAAAAGACTTTCTTGTTTAATGCCATTGAGAACA--T 59318 Query 102114 CCATGT-ATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGTCGCG 102169 || || || ||||||| || || ||||| || |||| | ||| | ||| | | Sbjct 59319 CCCGGTCATAAAAAAGAAGGCAGACTGGGCGCTGCGGTGGATATCAGATGCTAAGGCCAG 59378 Query 102170 TTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTC 102229 |||||| ||||| || | || ||||| |||||||| || ||||||||||| || || Sbjct 59379 ---CTTTGCAGAGCGGCTAGTGGCCTTTGCCTGTGTTGAAGGCATCTTCTTCTCCGGGTC 59435 Query 102230 CTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 102288 || ||| ||||| | ||||||||||| ||||| || ||||| || || |||||| | Sbjct 59436 ATT-TGCAGCTATCTTCTGGCTCAAGAAACGAGGACTTATGCCTGGGCTAACCTTCTCTA 59494 Query 102289 ACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCGGTGGAACTTTTCAAAT 102348 ||||||||||| || ||||| || || || || |||| ||| | | | Sbjct 59495 ACGAGCTTATCAGCCGAGACGAAGGCCTTCATTGCGACTTTG--------CTTGCCTACT 59546 Query 102349 TATTGCGTATTAAACCAACGACT--GAGACTATTCATTCTATTGTTAAGGAAGCCGTTGA 102406 || | || |||| | | || | || | || ||| | || ||||||| Sbjct 59547 ACACTCGCACCTAAACAACAAGTGCGATAAAATCAAGAAAATCGTTGAAGAGGCCGTTGT 59606 Query 102407 GATTGAGAAGGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAATTCTGA 102466 |||||||| | ||| ||| || || || || | ||||||| || || ||| || Sbjct 59607 AATTGAGAAAGAGTTCTTATGCGAGGCTCTCCCCGTCTCTCTCATTGGCATCAATGTCGA 59666 Query 102467 AAAGATGTCCGAATATATTGAGTATGTATCTGA-TAGATTGTTGAAGCAGATCGGGGTGC 102525 | |||| | | || ||||||| ||| |||| | || || | | | || | || Sbjct 59667 TACTATGTGCCAGTACATTGAGTTTGTTGCTGACCGGCTTCTTCTCTC-GCTTGGCGAGC 59725 Query 102526 CTCCAATTTGGAACTCCAAGAATCCATTTGACTTCATGGAGAACAT-TAGCCTCGACGGG 102584 | || | ||| || |||| ||||| ||||| |||||| |||| | || ||| || Sbjct 59726 CAAAGATATACAACGCCCAGAACCCATTCGACTTTATGGAGTACATCTCGCTGCGA-GGA 59784 Query 102585 AAGACAAACTTCTTCGAAAAGAGGGT 102610 ||| | ||||||||||| |||||||| Sbjct 59785 AAGTCCAACTTCTTCGAGAAGAGGGT 59810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742074110240