Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematocida_20displodere_20[genbank_20GCA_5F001642395.1_202016-05-11] 42 sequences; 3,066,400 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq4 116 4e-21 >seq4 Length=66353 Score = 116 bits (128), Expect = 4e-21 Identities = 297/443 (67%), Gaps = 18/443 (4%) Strand=Plus/Minus Query 119217 ACCCTCTTTTCGAAGAAATTCGTCTTACCATCG-AGTGAGATGTTTTCCATAAAGTCAAA 119275 |||||||| |||||||| || | ||| || ||| || ||||||| ||||||||||| || Sbjct 59810 ACCCTCTTCTCGAAGAAGTTGGACTTTCC-TCGCAGCGAGATGTACTCCATAAAGTCGAA 59752 Query 119276 AGGATTTTTGGAGTTCCAGATTGGTGGTTGACCAACTTGTTTCAGAAGACGATCGGAGAC 119335 || || | || ||| | || ||| | |||| ||||| || || | || Sbjct 59751 TGGGTTCTGGGCGTTGTATATCTTTGGCTCGCCAAGCGAGAGAAGAAGCCGGTCAGCAAC 59692 Query 119336 ATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGATTACACGGG-AGAG 119394 | |||| || || | | |||| | || ||| || || |||||| | ||||| |||| Sbjct 59691 AAACTCAATGTACTGGCACATAGTATCGACATTGATGCCAATGAGAG-AGACGGGGAGAG 59633 Query 119395 CATCGAGGATGAAGTTCTTCTCGATCTCCACAGCTTCTTTCACGATGGAGTGAATAGTTT 119454 | ||| | ||| | ||||| || | || || |||| ||||| | || ||| Sbjct 59632 CCTCGCATAAGAACTCTTTCTCAATTACAACGGCCTCTTCAACGATTTTCTTGAT--TTT 59575 Query 119455 CTGTCGATGGTTTGTTTCT---CAAGAGTT-TAAACAACTCTACGGCAAATTCTTGATGA 119510 | | | ||| |||| | || || || ||| ||||| || |||| Sbjct 59574 ATCGCACTTGTT-GTTTAGGTGCGAGTGTAGTAGGCAA-------GCAAAGTCGCAATGA 59523 Query 119511 AGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTT 119570 || ||||| || || ||| ||||| ||| |||| || |||||||| ||||||| | Sbjct 59522 AGGCCTTCGTCTCGGCTGATAAGCTCGTTAGAGAAGGTTAGCCCAGGCATAAGTCCTCGT 59463 Query 119571 TTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCG 119630 ||||| ||||| ||||| || ||| || || ||||||||||| || |||||||| Sbjct 59462 TTCTTGAGCCAGAAGATAGCTGCAAATGACCCGGAGAAGAAGATGCCTTCAACACAGGCA 59403 Query 119631 AAAGCGAATAGACGCTCAGCAAA 119653 || || | ||| ||||| ||||| Sbjct 59402 AAGGCCACTAGCCGCTCTGCAAA 59380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975690787600