Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nematocida_20displodere_20[genbank_20GCA_5F001642395.1_202016-05-11]
42 sequences; 3,066,400 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq4 159 4e-34
>seq4
Length=66353
Score = 159 bits (176), Expect = 4e-34
Identities = 414/616 (67%), Gaps = 14/616 (2%)
Strand=Plus/Minus
Query 37176 CATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAAT 37235
|| ||||| || ||||| | ||||| |||| || || | || ||||| |||||||
Sbjct 59540 CAAGCAAAGTCGCAATGAAGGCCTTCGTCTCGGCTGATAAGCTCGTTAGAGAAGGTTAGC 59481
Query 37236 CCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAA 37295
|| ||||| | |||| ||| || | ||| || || |||||||| || || || |||||
Sbjct 59480 CCAGGCATAAGTCCTCGTTTCTTGAGCCAGAAGATAGCTGCAAATGACCCGGAGAAGAAG 59421
Query 37296 ATACCTTCAACTGCTGCAAATGCTACAAGACG-TGTACCGAAAGTTGAACT-ATAATCAG 37353
|| |||||||| ||||| || || || || | | | |||| || || | ||| |
Sbjct 59420 ATGCCTTCAACACAGGCAAAGGCCACTAGCCGCTCTGC--AAAGCTGGCCTTAGCATCTG 59363
Query 37354 AAATCCAtttttttGTCCAATCTGCCTT-TAATTTAACACATTCAATTGTT-TCAATTGC 37411
| ||||| | ||| |||||||| | |||| || | |||| ||||| ||
Sbjct 59362 ATATCCACCGCAGCGCCCAGTCTGCCTTCTTTTTTATGACCGGGA--TGTTCTCAATGGC 59305
Query 37412 TTTTAAGA-GAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTAT 37470
|| || | |||||| |||| || ||| | || || || ||||| |||| |
Sbjct 59304 ATTAAACAAGAAAGTCTTTTCGCTCTGGCTCT-TGATGTACGTGTCAATGAGTAGGGAGT 59246
Query 37471 ACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAG 37530
|||| |||| ||| || || ||||| ||||| || || || || || | |||||||
Sbjct 59245 ACATCTCAGCGTGGATGTTCTCAATCATAATCTGGAAGCCGTAGAAGCATCGAGCTTCAC 59186
Query 37531 ATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAG 37590
| ||| || || |||||| | | | | |||||||||||| || || ||| |
Sbjct 59185 TGATTTGCACCTCAGAGGCAAACCTTTCAACCAGGTTTTCATTAACAATTCCGTCAGAGG 59126
Query 37591 CTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAA-TTTTTTC 37649
| |||||||| || || || || || || |||||||| | | ||| || | |
Sbjct 59125 CGGCAAAGAAGGCGAGGACGTAGGAAATGAAGTGTCTTTCGT-TGGCGTTAAGCTTCTCC 59067
Query 37650 CAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGCCAATGCA 37709
|| ||| || ||| || | || ||||| || ||||||| ||||| |||| |||
Sbjct 59066 CAGTCAGCCATGTCTCTTCCAAGGTCGACTTCTTCTGCGGTCCAGAAACTAGCCACTGCG 59007
Query 37710 CGTTTATACATCGTCCAAATATCATTATGTTGTATTGGAAATATTACAAATCTATCAGAT 37769
||| ||||| |||| || || | | || | |||||| || ||||||||||| | |
Sbjct 59006 TTTTTGTACATGTTCCAGATGTCGTAGTACTGCACTGGAAAGATGACAAATCTATCCG-T 58948
Query 37770 GAT-TCTTTAAGAATA 37784
| | |||| ||||||
Sbjct 58947 GCTCTCTTCTAGAATA 58932
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592316489033680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |