Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematocida_20displodere_20[genbank_20GCA_5F001642395.1_202016-05-11] 42 sequences; 3,066,400 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq4 159 4e-34 >seq4 Length=66353 Score = 159 bits (176), Expect = 4e-34 Identities = 414/616 (67%), Gaps = 14/616 (2%) Strand=Plus/Minus Query 37176 CATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAAT 37235 || ||||| || ||||| | ||||| |||| || || | || ||||| ||||||| Sbjct 59540 CAAGCAAAGTCGCAATGAAGGCCTTCGTCTCGGCTGATAAGCTCGTTAGAGAAGGTTAGC 59481 Query 37236 CCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAA 37295 || ||||| | |||| ||| || | ||| || || |||||||| || || || ||||| Sbjct 59480 CCAGGCATAAGTCCTCGTTTCTTGAGCCAGAAGATAGCTGCAAATGACCCGGAGAAGAAG 59421 Query 37296 ATACCTTCAACTGCTGCAAATGCTACAAGACG-TGTACCGAAAGTTGAACT-ATAATCAG 37353 || |||||||| ||||| || || || || | | | |||| || || | ||| | Sbjct 59420 ATGCCTTCAACACAGGCAAAGGCCACTAGCCGCTCTGC--AAAGCTGGCCTTAGCATCTG 59363 Query 37354 AAATCCAtttttttGTCCAATCTGCCTT-TAATTTAACACATTCAATTGTT-TCAATTGC 37411 | ||||| | ||| |||||||| | |||| || | |||| ||||| || Sbjct 59362 ATATCCACCGCAGCGCCCAGTCTGCCTTCTTTTTTATGACCGGGA--TGTTCTCAATGGC 59305 Query 37412 TTTTAAGA-GAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTAT 37470 || || | |||||| |||| || ||| | || || || ||||| |||| | Sbjct 59304 ATTAAACAAGAAAGTCTTTTCGCTCTGGCTCT-TGATGTACGTGTCAATGAGTAGGGAGT 59246 Query 37471 ACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAG 37530 |||| |||| ||| || || ||||| ||||| || || || || || | ||||||| Sbjct 59245 ACATCTCAGCGTGGATGTTCTCAATCATAATCTGGAAGCCGTAGAAGCATCGAGCTTCAC 59186 Query 37531 ATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAG 37590 | ||| || || |||||| | | | | |||||||||||| || || ||| | Sbjct 59185 TGATTTGCACCTCAGAGGCAAACCTTTCAACCAGGTTTTCATTAACAATTCCGTCAGAGG 59126 Query 37591 CTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAA-TTTTTTC 37649 | |||||||| || || || || || || |||||||| | | ||| || | | Sbjct 59125 CGGCAAAGAAGGCGAGGACGTAGGAAATGAAGTGTCTTTCGT-TGGCGTTAAGCTTCTCC 59067 Query 37650 CAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGCCAATGCA 37709 || ||| || ||| || | || ||||| || ||||||| ||||| |||| ||| Sbjct 59066 CAGTCAGCCATGTCTCTTCCAAGGTCGACTTCTTCTGCGGTCCAGAAACTAGCCACTGCG 59007 Query 37710 CGTTTATACATCGTCCAAATATCATTATGTTGTATTGGAAATATTACAAATCTATCAGAT 37769 ||| ||||| |||| || || | | || | |||||| || ||||||||||| | | Sbjct 59006 TTTTTGTACATGTTCCAGATGTCGTAGTACTGCACTGGAAAGATGACAAATCTATCCG-T 58948 Query 37770 GAT-TCTTTAAGAATA 37784 | | |||| |||||| Sbjct 58947 GCTCTCTTCTAGAATA 58932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592316489033680