Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematocida_20displodere_20[genbank_20GCA_5F001642395.1_202016-05-11] 42 sequences; 3,066,400 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 3e-12 >seq1 Length=651558 Score = 89.7 bits (98), Expect = 3e-12 Identities = 151/217 (70%), Gaps = 14/217 (6%) Strand=Plus/Plus Query 480560 GAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATC 480619 ||| ||||| || | || ||||| || || || ||||| || |||||||| || Sbjct 630373 GAGCACAAGGTGGATGGTGCTTTCCTTCTGAATGTTGTAATCTGCAAGAGTTCTTCCGTC 630432 Query 480620 TTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTC 480679 ||||| ||||| || ||||||||||| | || || || ||||| || ||||| ||||| Sbjct 630433 CTCAAGCTGCTTCCCGGCAAAAATAAGCCTCTGCTGGTCGGGAGGGATGCCTTCTTTGTC 630492 Query 480680 TTGAATCTTTTGT-TTGACAGCTTCAATAGTATCAGTGTGTGAAGT------TTCAAGGG 480732 || || ||| || || |||| |||| | |||| |||| | || | || Sbjct 630493 CTGGAT-TTTGGTCTTCACAGTGTCAA------CCGTGTCTGAATTCTCCACGTCTAAGG 630545 Query 480733 TAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||| || || || ||||| ||||| ||||| || || Sbjct 630546 TAATGGTCTTGCCTGTGAGTGTCTTTACGAAGATCTG 630582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268177398416216