Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nematocida_20displodere_20[genbank_20GCA_5F001642395.1_202016-05-11]
42 sequences; 3,066,400 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq4 132 6e-26
>seq4
Length=66353
Score = 132 bits (146), Expect = 6e-26
Identities = 300/439 (68%), Gaps = 18/439 (4%)
Strand=Plus/Plus
Query 65070 CTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATT 65129
||| || ||||| || | || ||||| ||||| || || ||||||||||||||||||||
Sbjct 59379 CTTTGCAGAGCGGCTAGTGGCCTTTGCCTGTGTTGAAGGCATCTTCTTCTCCGGGTCATT 59438
Query 65130 CTGC-GCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188
||| ||||| | ||| | ||||| || || || ||||| || ||| |||||| || |
Sbjct 59439 -TGCAGCTATCTTCTGGCTCAAGAAACGAGGACTTATGCCTGGGCTAACCTTCTCTAACG 59497
Query 65189 AACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACT- 65247
| ||||| |||||| || || || || || |||| | || || | | |||
Sbjct 59498 AGCTTATCAGCCGAGACGAAGGCCTTCATTGCGACTTTG-CTTG----CCTACTACACTC 59552
Query 65248 TTGCGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATT 65307
| ||| | | | | | ||| | ||| | ||||| ||||||| |||| |||
Sbjct 59553 GCACCTAA-ACAACAAGT-GCGATAAAATCAAGAAAATCGTTGAAGAGGCCGTTGTAATT 59610
Query 65308 GAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAG 65367
||||||| |||| | | || || ||||| |||||| || || || || |
Sbjct 59611 GAGAAAGAGTTCTTATGCGAGGCTCTCCCCGTCTCTCTCATTGGCATCAATGTCGATACT 59670
Query 65368 ATGTCCGAGTACATTGAGTATGTGTCGGATCG---TCTCCTCAAACAAGTTGGGGTGCCA 65424
|||| | |||||||||||| ||| | || || ||| ||| | |||| | ||||
Sbjct 59671 ATGTGCCAGTACATTGAGTTTGTTGCTGACCGGCTTCTTCTCTCGC---TTGGCGAGCCA 59727
Query 65425 CCCATTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACAT-TAGCCTTGATGGGAA 65483
|| | ||||| |||| ||||| ||||||||||| |||| | || || || ||
Sbjct 59728 AAGATATACAACGCCCAGAACCCATTCGACTTTATGGAGTACATCTCGCTGCGA-GGAAA 59786
Query 65484 GACCAACTTCTTTGAGAAG 65502
| |||||||||| ||||||
Sbjct 59787 GTCCAACTTCTTCGAGAAG 59805
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569286800960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |