Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematocida_20displodere_20[genbank_20GCA_5F001642395.1_202016-05-11] 42 sequences; 3,066,400 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq4 132 6e-26 >seq4 Length=66353 Score = 132 bits (146), Expect = 6e-26 Identities = 300/439 (68%), Gaps = 18/439 (4%) Strand=Plus/Plus Query 65070 CTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATT 65129 ||| || ||||| || | || ||||| ||||| || || |||||||||||||||||||| Sbjct 59379 CTTTGCAGAGCGGCTAGTGGCCTTTGCCTGTGTTGAAGGCATCTTCTTCTCCGGGTCATT 59438 Query 65130 CTGC-GCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188 ||| ||||| | ||| | ||||| || || || ||||| || ||| |||||| || | Sbjct 59439 -TGCAGCTATCTTCTGGCTCAAGAAACGAGGACTTATGCCTGGGCTAACCTTCTCTAACG 59497 Query 65189 AACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACT- 65247 | ||||| |||||| || || || || || |||| | || || | | ||| Sbjct 59498 AGCTTATCAGCCGAGACGAAGGCCTTCATTGCGACTTTG-CTTG----CCTACTACACTC 59552 Query 65248 TTGCGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATT 65307 | ||| | | | | | ||| | ||| | ||||| ||||||| |||| ||| Sbjct 59553 GCACCTAA-ACAACAAGT-GCGATAAAATCAAGAAAATCGTTGAAGAGGCCGTTGTAATT 59610 Query 65308 GAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAG 65367 ||||||| |||| | | || || ||||| |||||| || || || || | Sbjct 59611 GAGAAAGAGTTCTTATGCGAGGCTCTCCCCGTCTCTCTCATTGGCATCAATGTCGATACT 59670 Query 65368 ATGTCCGAGTACATTGAGTATGTGTCGGATCG---TCTCCTCAAACAAGTTGGGGTGCCA 65424 |||| | |||||||||||| ||| | || || ||| ||| | |||| | |||| Sbjct 59671 ATGTGCCAGTACATTGAGTTTGTTGCTGACCGGCTTCTTCTCTCGC---TTGGCGAGCCA 59727 Query 65425 CCCATTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACAT-TAGCCTTGATGGGAA 65483 || | ||||| |||| ||||| ||||||||||| |||| | || || || || Sbjct 59728 AAGATATACAACGCCCAGAACCCATTCGACTTTATGGAGTACATCTCGCTGCGA-GGAAA 59786 Query 65484 GACCAACTTCTTTGAGAAG 65502 | |||||||||| |||||| Sbjct 59787 GTCCAACTTCTTCGAGAAG 59805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569286800960