Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematocida_20displodere_20[genbank_20GCA_5F001642395.1_202016-05-11] 42 sequences; 3,066,400 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq12 84.2 6e-11 >seq12 Length=514210 Score = 84.2 bits (92), Expect = 6e-11 Identities = 170/247 (69%), Gaps = 4/247 (2%) Strand=Plus/Plus Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658 || || || || ||| || |||||| || || || ||||| || || | | || ||| Sbjct 21096 TGGATGTATCCCGTTTCAGCTGTTTTAACTGCCGTGTCAATCAGCCCCTCTCTTCCGCCC 21155 Query 302659 ATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCT-CTCAACGAA 302717 ||||| |||||||| | |||||| || || || | || | ||| | |||| | || Sbjct 21156 ATAGCGTGGAAGAAGAACTCTTCGGGAACGAGTCCACTGATGTACGAGTTGCTCA-CAAA 21214 Query 302718 ACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTT-CTCAT 302776 ||||| || || | |||| ||||| ||||| ||||| | |||||| || | Sbjct 21215 CCCACGACTTTCAGGGCCGTAGTCGTCTTTGGTGAAGTGGGGCAGCGACCTGTTTCTGA- 21273 Query 302777 AGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCG 302836 |||| | | || |||||||| || || ||||||| |||| || | | |||||||| Sbjct 21274 AGCCAAAGAGAATGCGCTTTCCCTCGACACTCTGCTGGCCCACACAGGCAGACATCTGCG 21333 Query 302837 AAATATT 302843 |||| || Sbjct 21334 AAATGTT 21340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816807978154