Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematocida_20displodere_20[genbank_20GCA_5F001642395.1_202016-05-11] 42 sequences; 3,066,400 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq1 105 6e-18 >seq1 Length=651558 Score = 105 bits (116), Expect = 6e-18 Identities = 143/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGT--AGAAGCCA 24761 ||||||||||| | || || || || || || || ||||| | || || |||| || Sbjct 630585 ATGCAGATCTTCGTAAAGACACTCACAGGCAAGACCATTACCTTAGACGTGGAGAATTCA 630526 Query 24762 CCGACACAGTAGAAACGGTAAA-ACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 ||||| || || || || || || ||| ||||| ||||||||||| || |||||||| Sbjct 630525 --GACACGGTTGACACTGTGAAGACCAAA-ATCCAGGACAAAGAAGGCATCCCTCCCGAC 630469 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || | | || ||||||||||| ||||| ||||| |||| | ||||||| Sbjct 630468 CAGCAGAGGCTTATTTTTGCCGGGAAGCAGCTTGAGGACGGAAGAACTCTTGCAGATTAC 630409 Query 24881 AACATTCAAAAGGAA 24895 |||||||| |||||| Sbjct 630408 AACATTCAGAAGGAA 630394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897363803760