Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematocida_20displodere_20[genbank_20GCA_5F001642395.1_202016-05-11] 42 sequences; 3,066,400 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 6e-11 >seq1 Length=651558 Score = 82.4 bits (90), Expect = 6e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || || || || | |||||||| ||||||||| | || |||| | Sbjct 630585 ATGCAGATCTTCGTAAAGACACTCACAGGCAAGACCATTACCTTAGACGTGGAGAATTCA 630526 Query 107616 GATACTGTCGGCCAGGTAAA-ACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || || | | || || || ||| || || ||||||||| | || || || Sbjct 630525 GACACGGTTGACACTGTGAAGACCAAA-ATCCAGGACAAAGAAGGCATCCCTCCCGACCA 630467 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| ||||||| ||| || || ||||| ||||||| | ||| | || || ||||| Sbjct 630466 GCAGAGGCTTATTTTTGCCGGGAAGCAGCTTGAGGACGGAAGAACTCTTGCAGATTACAA 630407 Query 107735 CATTCAAAAGGA 107746 |||||| ||||| Sbjct 630406 CATTCAGAAGGA 630395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398876595824938