Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematocida_20displodere_20[genbank_20GCA_5F001642395.1_202016-05-11] 42 sequences; 3,066,400 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 5e-11 >seq1 Length=651558 Score = 82.4 bits (90), Expect = 5e-11 Identities = 141/200 (71%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 33553 GTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCG 33612 ||||| || || || ||||||||||| | || || | | |||| || | || || ||| Sbjct 630389 GTGCTTTCCTTCTGAATGTTGTAATCTGCAAGAGTTCTTCCGTCCTCAAGCTGCTTCCCG 630448 Query 33613 GCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTC 33672 |||||||| | | |||||| || | || | ||||||||||| ||||| || | Sbjct 630449 GCAAAAATAAGCCTCTGCTGGTCGGGAGGGATGCCTTCTTTGTCCTGGATTTT-GGTCTT 630507 Query 33673 AACATAGTC-ACGGTGTCGCTTGAT--TCCACGTCAACCGTGATCGTTTTACCTGTTAAC 33729 ||| ||| || |||| || || |||||||| | || || || || ||||| | Sbjct 630508 CACAGTGTCAACCGTGT--CTGAATTCTCCACGTCTAAGGTAATGGTCTTGCCTGTGAGT 630565 Query 33730 GTTTTTACAAAGATCTGCAT 33749 || ||||| ||||||||||| Sbjct 630566 GTCTTTACGAAGATCTGCAT 630585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703831744640