Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematocida_20displodere_20[genbank_20GCA_5F001642395.1_202016-05-11] 42 sequences; 3,066,400 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq12 86.0 6e-12 >seq12 Length=514210 Score = 86.0 bits (94), Expect = 6e-12 Identities = 162/236 (69%), Gaps = 7/236 (3%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | || ||||| || | || || || ||||||| || || ||| || || Sbjct 293107 ATGCAGATATTCGTAAAGACGCTTACAGGCAAGACGATCACCATTGACGTCCAAAGCACT 293166 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || || ||| | ||||| ||| ||| || || ||||| ||||| | || ||| Sbjct 293167 GACACAATAGAGAACGTAAAGGCAAAGATTCAGGACAAGGAGGGAATACCTTCTGACCAG 293226 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG--AAATGTCAGCGATTACA 25352 |||||||| || | || ||| || || || || |||| || | | ||| || |||| Sbjct 293227 CAAAGACTTATCTTCGCCGGAAAGCAGCTTGAGGATGGAAGGACACTTTCA--GACTACA 293284 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATT---GAGAGGAGGAAAA 25405 | ||||| || ||| ||| |||||| | ||| | || | | ||||||||||| Sbjct 293285 ACATTCAGAAGGAAAGCACGATTCATCTGGTGCTCAGGCTCCGGGGAGGAGGAAAA 293340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445094166325440