Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematocida_20displodere_20[genbank_20GCA_5F001642395.1_202016-05-11] 42 sequences; 3,066,400 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq40 89.7 6e-13 >seq40 Length=122991 Score = 89.7 bits (98), Expect = 6e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 147016 AGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGG 147075 ||||| | |||||||||||||||||| |||| || ||||| | ||| || || | |||| Sbjct 22452 AGCAGGGCGTAGCTGGCTATGTTGAAAGGGATGCCAAGGCCGACGTCTCCTGAGCGCTGG 22393 Query 147076 TACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGGCACAGGATGTGGCACGGC 147135 || || ||| ||||| || || || ||||||| | || | |||||||| Sbjct 22392 TAGAGAATGCAGTTGAGCTTTTGGTTGGTAACTGCAAACTGGAAGAGAACATGGCACGGA 22333 Query 147136 GGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTC 147195 || || ||||| || || || |||| |||||||| |||||||||| | || Sbjct 22332 GGAAGAGCCATTTCGTCAAGATCAACGGGATTCCAGGCACTTACCACCAGCCTACGACTG 22273 Query 147196 TCGGGGTTCCTCTTAATCTCTTCGATAAC 147224 | ||||| | || | ||| | |||||| Sbjct 22272 TTTGGGTTTGTTTTCAGCTCATTGATAAC 22244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583487693668800