Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematocida_20displodere_20[genbank_20GCA_5F001642395.1_202016-05-11] 42 sequences; 3,066,400 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq4 206 2e-48 >seq4 Length=66353 Score = 206 bits (228), Expect = 2e-48 Identities = 410/596 (69%), Gaps = 17/596 (3%) Strand=Plus/Plus Query 43696 TAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACA 43755 ||| |||||| | |||||| | || || | ||||| ||| | ||||||||||| ||| Sbjct 58953 TAGATTTGTCATCTTTCCAGTGCAGTACTACGACATCTGGAACATGTACAAAAACGCAGT 59012 Query 43756 GGCGTCATTTTGGACAGCAGAAGAAGTTGA--TTTGACTAAAGACTTAGCACATTGG-AT 43812 ||| || ||||| ||||||||||| || || || | |||| | || | ||| | Sbjct 59013 GGCTAGTTTCTGGACCGCAGAAGAAGTCGACCTTGGA--AGAGACATGGCTGACTGGGAG 59070 Query 43813 TGCATTAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAG 43872 |||| ||| | |||| ||| || || || | || | || || ||||| || Sbjct 59071 AAGCTTAACGCCA-ACGAAAGACACTTCATTTCCTACGTCCTCGCCTTCTTTGCCGCCTC 59129 Query 43873 CGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGA 43932 ||||| || || |||||||| ||||| ||||||| || || ||| | || Sbjct 59130 TGACGGAATTGTTAATGAAAACCTGGTTGAAAGGTTTGCCTCTGAGGTGCAAATCAGTGA 59189 Query 43933 AGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAG 43992 ||| ||||| || || || || || ||| || || || || || | || |||||| Sbjct 59190 AGCTCGATGCTTCTACGGCTTCCAGATTATGATTGAGAACATCCACGCTGAGATGTACTC 59249 Query 43993 TCTTCTGATAGATACGTACATCAAAGATGGGCA---CGAGAAGCATCGATTGTTTAATGC 44049 || || || || ||||||||||| || | || ||| ||| | ||||||||||| Sbjct 59250 CCTACTCATTGACACGTACATCAA-GA--GCCAGAGCGAAAAGACTTTCTTGTTTAATGC 59306 Query 44050 GATAGA-AACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAA--- 44105 || || |||| | || | || ||| | || ||||||||||| || |||||| Sbjct 59307 CATTGAGAACA-TCCCGGTCATAAAAAAGAAGGCAGACTGGGCGCTGCGGTGGATATCAG 59365 Query 44106 ATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCT 44165 || | || | |||| ||| || || || || ||||| ||| |||||||| |||| Sbjct 59366 ATGCTAAGGCCAGCTTTGCAGAGCGGCTAGTGGCCTTTGCCTGTGTTGAAGGCATCTTCT 59425 Query 44166 TTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGA 44225 | || || || ||||| || || || ||| | ||||||||||| | ||||||||| | | Sbjct 59426 TCTCCGGGTCATTTGCAGCTATCTTCTGGCTCAAGAAACGAGGACTTATGCCTGGGCTAA 59485 Query 44226 CGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGC 44281 | || || || ||| | || || || || |||||| | |||||||| ||||||||| Sbjct 59486 CCTTCTCTAACGAGCTTATCAGCCGAGACGAAGGCCTTCATTGCGACTTTGCTTGC 59541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455796552210