Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematocida_20displodere_20[genbank_20GCA_5F001642395.1_202016-05-11] 42 sequences; 3,066,400 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq4 143 3e-29 >seq4 Length=66353 Score = 143 bits (158), Expect = 3e-29 Identities = 523/804 (65%), Gaps = 26/804 (3%) Strand=Plus/Plus Query 94441 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTCTAAATGAA 94500 ||||| || ||||| || || || || || ||| || ||| ||| || || | Sbjct 59023 TGGACCGCAGAAGAAGTCGACCTTGGAAGAGACATGGCTGACTGGGAGAAGCTTAACGCC 59082 Query 94501 AATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGATCCGATGGAATTGTT 94560 || |||| | ||||| ||| |||| || |||||||| | || || ||||||||| Sbjct 59083 AACGAAAGACACTTCATTTCCTACGTCCTCGCCTTCTTTGCCGCCTCTGACGGAATTGTT 59142 Query 94561 TTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCAATCCTCTGAAGCGAGATCCTTC 94620 ||| || | | | | ||||| |||||||||| | |||||| ||| |||| Sbjct 59143 AATGAAAACCTGGTTGAAAGGTTTGCCTCTGAGGTGCAAATCAGTGAAGCTCGATGCTTC 59202 Query 94621 TATGCGTATCAGTGTCATAATGAAATGGTGCATGGGGAGACATACAGTAAACTCATAGAC 94680 || | | ||| | | ||| | | || | |||| ||| |||||| ||| Sbjct 59203 TACGGCTTCCAGATTATGATTGAGAACATCCACGCTGAGATGTACTCCCTACTCATTGAC 59262 Query 94681 AAGTATATTAAG-GATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCA-AACAGTTC 94738 | ||| || ||| | | || || |||| | ||| | ||||| | |||| | | Sbjct 59263 ACGTACATCAAGAGCCAGAGC-GAAAAGACTTTCTTGTTTAATGCCATTGAGAACA-TCC 59320 Query 94739 CGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGTCGCGTT 94795 || || ||||||| || || ||||| || |||| | ||| | ||| | | Sbjct 59321 CGGTCATAAAAAAGAAGGCAGACTGGGCGCTGCGGTGGATATCAGATGCTAAGGCCAG-- 59378 Query 94796 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 94855 |||||| ||||| || | || ||||| |||||||| || ||||||||||| || || | Sbjct 59379 -CTTTGCAGAGCGGCTAGTGGCCTTTGCCTGTGTTGAAGGCATCTTCTTCTCCGGGTCAT 59437 Query 94856 TCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 94914 | ||| ||||| | ||||||||||| ||||| || ||||| || || |||||| ||| Sbjct 59438 T-TGCAGCTATCTTCTGGCTCAAGAAACGAGGACTTATGCCTGGGCTAACCTTCTCTAAC 59496 Query 94915 GAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCGGTGGAACTTTTCAAATTA 94974 ||||||||| || ||||| || || || || |||| ||| | | | Sbjct 59497 GAGCTTATCAGCCGAGACGAAGGCCTTCATTGCGACTTTG--------CTTGCCTACTAC 59548 Query 94975 TTGCGTATTAAACCAACGACT--GAGACTATTCATTCTATTGTTAAGGAAGCCGTTGAGA 95032 || | || |||| | | || | || | || ||| | || ||||||| | Sbjct 59549 ACTCGCACCTAAACAACAAGTGCGATAAAATCAAGAAAATCGTTGAAGAGGCCGTTGTAA 59608 Query 95033 TTGAGAAAGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAATTCTGAAA 95092 ||||||||| ||| ||| || || || || | ||||||| || || ||| || | Sbjct 59609 TTGAGAAAGAGTTCTTATGCGAGGCTCTCCCCGTCTCTCTCATTGGCATCAATGTCGATA 59668 Query 95093 AAATGTCTGAATATATTGAGTATGTATCTGA-TAGATTGTTGAAGCAGATCGGGGTGCCT 95151 |||| | || ||||||| ||| |||| | || || | | | || | ||| Sbjct 59669 CTATGTGCCAGTACATTGAGTTTGTTGCTGACCGGCTTCTTCTCTC-GCTTGGCGAGCCA 59727 Query 95152 CCAATTTGGAACTCCAAGAATCCATTTGACTTCATGGAGAACAT-TAGCCTCGACGGGAA 95210 || | ||| || |||| ||||| ||||| |||||| |||| | || ||| || || Sbjct 59728 AAGATATACAACGCCCAGAACCCATTCGACTTTATGGAGTACATCTCGCTGCGA-GGAAA 59786 Query 95211 GACAAACTTCTTCGAAAAGAGGGT 95234 | | ||||||||||| |||||||| Sbjct 59787 GTCCAACTTCTTCGAGAAGAGGGT 59810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260493788080