Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematocida_20displodere_20[genbank_20GCA_5F001642395.1_202016-05-11] 42 sequences; 3,066,400 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 9e-16 >seq1 Length=651558 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 39088 GTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCC 39147 ||||| || || || || || ||||| ||||| |||| | |||| |||||||| || || Sbjct 630389 GTGCTTTCCTTCTGAATGTTGTAATCTGCAAGAGTTCTTCCGTCCTCAAGCTGCTTCCCG 630448 Query 39148 GCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTG 39207 ||||| ||||| | ||||||||||| || | || ||||||||| |||||| || Sbjct 630449 GCAAAAATAAGCCTCTGCTGGTCGGGAGGGATGCCTTCTTTGTCCTGGATTTTGGTCTTC 630508 Query 39208 AGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTT 39267 | || | ||||| || ||||||||| | || || | || || || || || Sbjct 630509 ACAGTGTCAACCGTGTCTGAATTCTCCACGTCTAAGGTAATGGTCTTGCCTGTGAGTGTC 630568 Query 39268 TTAACAAAGATTTGCAT 39284 || || ||||| ||||| Sbjct 630569 TTTACGAAGATCTGCAT 630585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429545380126346