Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematocida_20displodere_20[genbank_20GCA_5F001642395.1_202016-05-11] 42 sequences; 3,066,400 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq4 172 6e-38 >seq4 Length=66353 Score = 172 bits (190), Expect = 6e-38 Identities = 410/612 (67%), Gaps = 6/612 (1%) Strand=Plus/Minus Query 23509 CATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAAT 23568 || ||||| || ||||| |||||||| || | || || | || ||||| || |||| Sbjct 59540 CAAGCAAAGTCGCAATGAAGGCCTTCGTCTCGGCTGATAAGCTCGTTAGAGAAGGTTAGC 59481 Query 23569 CCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAA 23628 || ||||| | ||||||||| || | ||| || || || |||||||| ||||| ||||| Sbjct 59480 CCAGGCATAAGTCCTCGTTTCTTGAGCCAGAAGATAGCTGCAAATGACCCGGAGAAGAAG 59421 Query 23629 ATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAA 23688 || || |||||| ||||||||||| || || |||| | || ||| ||| || Sbjct 59420 ATGCCTTCAACACAGGCAAAGGCCACTAGCCGCTCTGCAAAGCTGGCCTTAGCATCTGAT 59361 Query 23689 ATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTT 23748 ||||| | ||| | |||||| ||||| | || | ||||| || || Sbjct 59360 ATCCACCGCAGCGCCCAGTCTGCCTTCTTTTTTATGACCGGGATGTTCTCAATGGCATTA 59301 Query 23749 AAGAGAAAAGTTTTTTC-TTCATTATCTGTTATATATGTATCAATTAGTAAACTATACAT 23807 || | ||||| ||||| || ||| | || || || ||||| |||| ||||| Sbjct 59300 AACAAGAAAGTCTTTTCGCTCTGGCTCT-TGATGTACGTGTCAATGAGTAGGGAGTACAT 59242 Query 23808 TTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAA 23867 |||| || || || ||||| |||||| || || || || |||| ||||||| | Sbjct 59241 CTCAGCGTGGATGTTCTCAATCATAATCTGGAAGCCGTAGAAGCATCGAGCTTCACTGAT 59182 Query 23868 TTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGC 23927 ||| || ||| ||| |||| | | | ||||| |||||||| || ||| || || Sbjct 59181 TTGCACCTCAGAGGCAAACCTTTCAACCAGGTTTTCATTAACAATTCCGTCAGAGGCGGC 59122 Query 23928 AAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAA-TTTTTTCCAAT 23986 |||||| || || || || || || |||||||| | | | ||| || | ||| | Sbjct 59121 AAAGAAGGCGAGGACGTAGGAAATGAAGTGTCTTTCGT-TGGCGTTAAGCTTCTCCCAGT 59063 Query 23987 CATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCT 24046 || || ||| || | || ||||| || | ||||| ||||| |||| || | Sbjct 59062 CAGCCATGTCTCTTCCAAGGTCGACTTCTTCTGCGGTCCAGAAACTAGCCACTGCGTTTT 59003 Query 24047 TATACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAATCTATCAGATGAT- 24105 | ||||| ||| || || | | || | |||||| || || |||||||| | || | Sbjct 59002 TGTACATGTTCCAGATGTCGTAGTACTGCACTGGAAAGATGACAAATCTATCCG-TGCTC 58944 Query 24106 TCTTTAAGAATA 24117 |||| |||||| Sbjct 58943 TCTTCTAGAATA 58932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487726218800