Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematocida_20displodere_20[genbank_20GCA_5F001642395.1_202016-05-11] 42 sequences; 3,066,400 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq1 113 3e-20 >seq1 Length=651558 Score = 113 bits (124), Expect = 3e-20 Identities = 164/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC- 44169 || || || || || | ||| ||||| | ||||| ||||| || ||||||||||| || Sbjct 630359 CCTCCCCTGAGCCTGAGCACAAGGTGGATGGTGCTTTCCTTCTGAATGTTGTAATCTGCA 630418 Query 44170 -GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 ||||| | |||| || ||||||||||||||||| || | | |||||| || | || Sbjct 630419 AGAGTT--CTTCCGTCCTCAAGCTGCTTCCCGGCAAAAATAAGCCTCTGCTGGTCGGGAG 630476 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCA 44288 | | ||||| || ||| || || ||||| || | | ||||| | |||| Sbjct 630477 GGATGCCTTCTTTGTCCTGGATTTTGGTCTTCACAGTGTCAACCGTGTCTGAATTCTCCA 630536 Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | || | ||||| ||||| || ||||| ||||| |||||||| |||||| Sbjct 630537 CGTCTAAGGTAATGGTCTTGCCTGTGAGTGTCTTTACGAAGATCTGCATG 630586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990215729914