Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nematocida_20sp._20ERTm5_20[genbank_20GCA_5F001642415.1_202016-05-
11] 186 sequences; 4,397,606 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq105 194 2e-44
>seq105
Length=68279
Score = 194 bits (214), Expect = 2e-44
Identities = 486/735 (66%), Gaps = 14/735 (2%)
Strand=Plus/Minus
Query 16030 TAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAG 16089
||| | |||||| ||||| || || || || ||||| |||| | || || ||||| |
Sbjct 55972 TAACCGATCTGCCACAAACTCAATGTACTGGCACATAGAGTCTGAGTTGATGCCTATTAA 55913
Query 16090 TCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGAT 16149
|| ||||| || | |||||||| | || ||| ||| |||| || ||| || ||
Sbjct 55912 AGAAACAGGAAGTGCATCAGTTAAAAACTCTTTTTCAATCTCAACTGCCTCTAAAACTAT 55853
Query 16150 ATCGGTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTG----TTTAAACATTAGACACG 16205
| || | | || || | | |||| ||||| | |||| ||||| |
Sbjct 55852 TTTCTTGA-TATTCTTACACTTGTT-TATG----AGGTGAGAATGTAAA----AGACAGG 55803
Query 16206 CGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTG 16265
| ||||| || || |||||||| ||||||||||| || ||||| || ||||| | ||||
Sbjct 55802 CAAAGTCACAGTGAAGTCCTTCATCTCTGCTGATCAGCTCGTTAGAGAAAGTAAGACCTG 55743
Query 16266 GCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATAC 16325
|||| |||| ||||| | |||||| || | |||||||| || || |||||||| |
Sbjct 55742 GCATAAGGCCTCTCTTCTTAAGCCAGAAAATTGATGCAAATGATCCAGAGAAGAATATTC 55683
Query 16326 CCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCC 16385
|||| ||| |||||||||| | || | || || | ||| || || | ||||
Sbjct 55682 CCTCTACACATGCAAAAGCAACTAGCCTGTCTGCAAAGCTAGACTCCTTGTCTGATATCC 55623
Query 16386 ATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACA 16445
| | | |||| || || || | |||||| | || | || || |||| || |
Sbjct 55622 ACCTAAGGGCCCAGTCTGCCTTCTTTTTTATTACAGGAATATTCTCCATTGCCTGGAATA 55563
Query 16446 ATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTG 16505
| | ||||| | |||| | || || || || || |||||||| ||||| ||||
Sbjct 55562 AGAAGTTCTTTTCTGCAGTATCCTTGATGTAGGTGTCTATTAGTAAACTATACATCTCTG 55503
Query 16506 AGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTA 16565
||||||||| ||||| || || ||||| ||||| |||| ||||| |||||| |
Sbjct 55502 CGTGTATGTTTTCTATCATAATTTGGAATCCGTAGAAACATCTTGCCTCGCTTATTTGAA 55443
Query 16566 CTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAA 16625
|||| ||| | ||| | | ||| ||||| || || || || |||||||| |
Sbjct 55442 CTTCTGAAGCAAACCTTTCAACTAAGTTTTCATTTACAATTCCATCTGAGGCAGCAAAGA 55383
Query 16626 ACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAATATGCCAATCTTTTA 16685
| || | || | || || | | | || | | | || | | ||| || |
Sbjct 55382 ATGCAAGTACATAGGAGATAAAGTGTCTCTCATTTGCATTTAGCTTTTCCCAGTCAGCTT 55323
Query 16686 AATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACA 16745
|| || || | || |||||||||| ||||| || |||||||| | ||||||||
Sbjct 55322 GGTCATTTGACAAGTCAACTTCTTCTGCAGTCCAGAATACTGCCACTGCATCTTTATACA 55263
Query 16746 TTTTCCAAATATCAT 16760
|| |||||||||||
Sbjct 55262 TTGCCCAAATATCAT 55248
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511413210961520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |