Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematocida_20sp._20ERTm5_20[genbank_20GCA_5F001642415.1_202016-05- 11] 186 sequences; 4,397,606 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq106 98.7 8e-16 >seq106 Length=63987 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 || ||||||| ||| | ||| | || | |||||||||||||| ||||||||||| Sbjct 37673 CCTCCTCTCAGTCTCAGTACAAGATGAATGGTGCTCTCCTTCTGGATGTTGTAGTCAGAA 37614 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || | | || |||||||||||||| || || || || | |||||||||||||| Sbjct 37613 AGGGTTCTTCCATCTTCCAGTTGTTTTCCTGCAAAGATTAATCTTTGTTGGTCGGGAGGG 37554 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | || ||||||||| || ||| || || | | | |||| | || || Sbjct 37553 ATTCCTTCCTTGTCCTGTATCTTTGCTTTTACATTCTCTATTGTGTCACTTGGTTCTACT 37494 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| |||||| ||||| || || || || || ||||| || ||||| Sbjct 37493 TCCAGGGTAATTGTCTTACCAGTGAGTGTTTTTACAAATATCTGCAT 37447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395074304413906