Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematocida_20sp._20ERTm5_20[genbank_20GCA_5F001642415.1_202016-05- 11] 186 sequences; 4,397,606 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq103 86.0 6e-12 >seq103 Length=70461 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 138424 TCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAG 138483 || ||||| ||||||||||| | || | ||||| || ||||| || | | || Sbjct 50318 TCTTTTTGTATGTTGTAGTCAGAAAGTGTTCTTCCATCCTCCAGCTGTTTTCCTGCAAAG 50259 Query 138484 ATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGT 138543 |||| | |||||||| || ||||| ||||||||||| || ||| ||||| | Sbjct 50258 ATTAATCTTTGTTGGTCGGGTGGTATTCCTTCTTTGTCTTGTATCTTTGCTTTTACATTC 50199 Query 138544 TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACA 138603 || | ||||| | | || || || | || | ||||||||||| || || ||||| Sbjct 50198 TCTATTGTGTCACTTGGTTCTACTTCAAGTGTAATGGTTTTACCAGTGAGTGTCTTTACG 50139 Query 138604 AAAATCTGCATGGCT 138618 || |||||||||||| Sbjct 50138 AATATCTGCATGGCT 50124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261246189920