Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematocida_20sp._20ERTm5_20[genbank_20GCA_5F001642415.1_202016-05- 11] 186 sequences; 4,397,606 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 1e-11 >seq1 Length=377182 Score = 87.8 bits (96), Expect = 1e-11 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 518169 TATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAA 518228 |||| | ||||| | || ||| || ||||| ||||| || || | ||| | ||||| | Sbjct 221917 TATCTATGCCATATGAAAGAGCTGCCGCAGTAGGTTCGTTTATCACTCTTAGCACATTTA 221858 Query 518229 GACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAG 518288 |||||||||| || | |||| ||||| || || ||||| || |||| ||||||| Sbjct 221857 GACCAGCAATCTCACCCGATACTTTTGTGGCCTGCCTCTGTGAGTCTGTAAAGTATGCAG 221798 Query 518289 GAACAGTAATAACGGC 518304 ||||||| ||||| || Sbjct 221797 GAACAGTTATAACAGC 221782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780813170067316